WormBase Tree Display for Gene: WBGene00010290

WBGene00010290 SMap: S_parent: Sequence: CHROMOSOME_V
  Identity: Version: 2
    Name: Sequence_name: F58H1.7
      Molecular_name: F58H1.7a
        F58H1.7a.1
        CE20895
        F58H1.7b
        CE11412
        F58H1.7b.1
      Other_name: nrap-1 Paper_evidence: WBPaper00053454
          Remark: This name was not requested prior to publication. It is felt that this would introduce confusion as there is a human gene NRAP which is not the ortholog of this gene. This gene also appears to be restricted to invertebrates as there is only a single fly ortholog according to AGR/DIOPT.
        CELE_F58H1.7 Accession_evidence: NDB BX284605
      Public_name: F58H1.7
    DB_info: Database: AceView gene 5M444
        WormQTL gene WBGene00010290
        WormFlux gene WBGene00010290
        NDB locus_tag CELE_F58H1.7
        Panther gene CAEEL|WormBase=WBGene00010290|UniProtKB=G5EBT2
          family PTHR20967
        NCBI gene 179636
        RefSeq protein NM_001047675.4
            NM_001047674.3
        TrEMBL UniProtAcc G5EEF9
            G5EBT2
        UniProt_GCRP UniProtAcc G5EBT2
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 02 Jan 2021 22:55:32 WBPerson1983 Name_change: Other_name: nrap-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (38)
    Strain: WBStrain00033186
    RNASeq_FPKM (74)
    Ortholog: WBGene00041712 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00052395 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00140569 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00118329 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00120950 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00193459 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g2081 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g14245 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10648 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12025 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g833 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g7068 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4341 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14874 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g6594 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g14373 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00935.g15011 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-F58H1.7 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g7758 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00230.g7556 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10714 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018149 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00648 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16716 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50143100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15891 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00265210 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0051221 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Expressed in glutamatergic neurons. Is predicted to encode a protein with the following domains: LDL receptor-like superfamily; Low-density lipoprotein (LDL) receptor class A repeat; and Low-density lipoprotein receptor domain class A. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F58H1.7a
      F58H1.7b
    Corresponding_transcript: F58H1.7a.1
      F58H1.7b.1
    Other_sequence (47)
    Associated_feature (12)
  Experimental_info: RNAi_result: WBRNAi00002177 Inferred_automatically: RNAi_primary
      WBRNAi00049072 Inferred_automatically: RNAi_primary
      WBRNAi00111163 Inferred_automatically: RNAi_primary
      WBRNAi00016027 Inferred_automatically: RNAi_primary
      WBRNAi00033529 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr13695
      Expr1017647
      Expr1034490
      Expr1152812
      Expr2004426
      Expr2022649
    Drives_construct: WBCnstr00031523
      WBCnstr00039944
    Construct_product: WBCnstr00031523
      WBCnstr00039944
    Microarray_results (27)
    Expression_cluster (244)
    Interaction (91)
  Map_info: Positive: Positive_clone: F58H1 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 3.5457
  Reference: WBPaper00053454
    WBPaper00060161
    WBPaper00064302
  Method: Gene