WormBase Tree Display for Gene: WBGene00010290
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| WBGene00010290 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | F58H1.7 | |||||||
| Molecular_name | F58H1.7a | ||||||||
| F58H1.7a.1 | |||||||||
| CE20895 | |||||||||
| F58H1.7b | |||||||||
| CE11412 | |||||||||
| F58H1.7b.1 | |||||||||
| Other_name | nrap-1 | Paper_evidence | WBPaper00053454 | ||||||
| Remark | This name was not requested prior to publication. It is felt that this would introduce confusion as there is a human gene NRAP which is not the ortholog of this gene. This gene also appears to be restricted to invertebrates as there is only a single fly ortholog according to AGR/DIOPT. | ||||||||
| CELE_F58H1.7 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | F58H1.7 | ||||||||
| DB_info | Database | AceView | gene | 5M444 | |||||
| WormQTL | gene | WBGene00010290 | |||||||
| WormFlux | gene | WBGene00010290 | |||||||
| NDB | locus_tag | CELE_F58H1.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010290|UniProtKB=G5EBT2 | |||||||
| family | PTHR20967 | ||||||||
| NCBI | gene | 179636 | |||||||
| RefSeq | protein | NM_001047675.4 | |||||||
| NM_001047674.3 | |||||||||
| TrEMBL | UniProtAcc | G5EEF9 | |||||||
| G5EBT2 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EBT2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Jan 2021 22:55:32 | WBPerson1983 | Name_change | Other_name | nrap-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (38) | |||||||||
| Strain | WBStrain00033186 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Expressed in glutamatergic neurons. Is predicted to encode a protein with the following domains: LDL receptor-like superfamily; Low-density lipoprotein (LDL) receptor class A repeat; and Low-density lipoprotein receptor domain class A. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F58H1.7a | |||||||
| F58H1.7b | |||||||||
| Corresponding_transcript | F58H1.7a.1 | ||||||||
| F58H1.7b.1 | |||||||||
| Other_sequence (47) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00002177 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049072 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111163 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016027 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033529 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13695 | ||||||||
| Expr1017647 | |||||||||
| Expr1034490 | |||||||||
| Expr1152812 | |||||||||
| Expr2004426 | |||||||||
| Expr2022649 | |||||||||
| Drives_construct | WBCnstr00031523 | ||||||||
| WBCnstr00039944 | |||||||||
| Construct_product | WBCnstr00031523 | ||||||||
| WBCnstr00039944 | |||||||||
| Microarray_results | SMD_F58H1.7 | ||||||||
| 192216_at | |||||||||
| A_12_P106100 | |||||||||
| A_12_P156925 | |||||||||
| A_12_P156926 | |||||||||
| A_12_P156927 | |||||||||
| A_12_P156928 | |||||||||
| A_12_P156929 | |||||||||
| Aff_F58H1.7 | |||||||||
| GPL13394_WBGene00010290 | |||||||||
| GPL13914_F58H1.7 | |||||||||
| GPL14144_F58H1.7a_12-71_0.791_34_C | |||||||||
| GPL14144_F58H1.7a_332-391_0.914_9_A | |||||||||
| GPL14144_F58H1.7a_398-457_0.952_1_B | |||||||||
| GPL19516_CGZ0025398 | |||||||||
| GPL19516_CGZ0025399 | |||||||||
| GPL21109_F58H1.7a | |||||||||
| GPL3518_CE20895 | |||||||||
| GPL8304_CE_WBGene00010290_A | |||||||||
| GPL8673_F58H1_7aP00005 | |||||||||
| GPL8673_F58H1_7aP00132 | |||||||||
| GPL8673_F58H1_7aP00360 | |||||||||
| GPL8673_F58H1_7bP00005 | |||||||||
| GPL8673_F58H1_7bP00126 | |||||||||
| GPL8673_F58H1_7bP00354 | |||||||||
| GPL9450_F58H1.7 | |||||||||
| cea2.c.36879 | |||||||||
| Expression_cluster (244) | |||||||||
| Interaction (91) | |||||||||
| Map_info | Positive | Positive_clone | F58H1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 3.5457 | |||||||
| Reference | WBPaper00053454 | ||||||||
| WBPaper00060161 | |||||||||
| WBPaper00064302 | |||||||||
| Method | Gene |
