WormBase Tree Display for Gene: WBGene00010239

WBGene00010239 SMap: S_parent: Sequence: F58B4
  Identity: Version: 1
    Name: Sequence_name: F58B4.6
      Molecular_name: F58B4.6
        F58B4.6.1
        CE34892
        F58B4.6.2
      Other_name: CELE_F58B4.6 Accession_evidence: NDB BX284605
      Public_name: F58B4.6
    DB_info: Database: AceView gene 5L405
        WormQTL gene WBGene00010239
        WormFlux gene WBGene00010239
        NDB locus_tag CELE_F58B4.6
        Panther gene CAEEL|WormBase=WBGene00010239|UniProtKB=Q7YX11
          family PTHR34721
        NCBI gene 3565238
        RefSeq protein NM_001028824.3
        TREEFAM TREEFAM_ID TF322409
        TrEMBL UniProtAcc Q7YX11
        UniProt_GCRP UniProtAcc Q7YX11
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (29)
    RNASeq_FPKM (74)
    Ortholog: WBGene00091457 Pristionchus pacificus From_analysis: OMA
      WBGene00031268 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00066233 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00156327 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00143723 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00136688 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00214082 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g2258 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3032 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10371 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g910 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g17935 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g18660 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4709 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4122 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5192 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1573 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-F58B4.6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00065.g3108 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_12173 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016559 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00011 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_50303400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15639 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00007299 Caenorhabditis elegans From_analysis: Panther
      WBGene00010236 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00018874 Caenorhabditis elegans From_analysis: Panther
      WBGene00015805
      WBGene00020995 Caenorhabditis elegans From_analysis: Panther
      WBGene00014125 Caenorhabditis elegans From_analysis: Panther
      WBGene00017296 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Automated_description: Enriched in coelomocyte; head mesodermal cell; intestine; and neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and eat-2 based on tiling array; RNA-seq; and microarray studies. Is affected by eight chemicals including Tunicamycin; stavudine; and Zidovudine based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F58B4.6
    Corresponding_transcript: F58B4.6.1
      F58B4.6.2
    Associated_feature: WBsf647212
      WBsf1001234
      WBsf1020383
      WBsf232430
      WBsf232431
  Experimental_info: Expr_pattern: Expr1013350
      Expr1034467
      Expr1152698
      Expr2004379
      Expr2022603
    Drives_construct: WBCnstr00031560
    Construct_product: WBCnstr00031560
    Microarray_results (13)
    Expression_cluster (114)
  Map_info: Positive: Positive_clone: F58B4 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 2.83176
  Method: Gene