WormBase Tree Display for Gene: WBGene00010205

WBGene00010205 SMap: S_parent: Sequence: F57F5
  Identity: Version: 1
    Name: Sequence_name: F57F5.3
      Molecular_name: F57F5.3
        F57F5.3.1
        CE06001
      Other_name: CELE_F57F5.3 Accession_evidence: NDB BX284605
      Public_name: F57F5.3
    DB_info: Database: AceView gene 5M484
        WormQTL gene WBGene00010205
        WormFlux gene WBGene00010205
        NDB locus_tag CELE_F57F5.3
        NCBI gene 179646
        RefSeq protein NM_073611.4
        TREEFAM TREEFAM_ID TF319737
        TrEMBL UniProtAcc Q20951
        UniProt_GCRP UniProtAcc Q20951
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (31)
    RNASeq_FPKM (74)
    GO_annotation: 00069727
    Ortholog (21)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F57F5.3
    Corresponding_transcript: F57F5.3.1
    Associated_feature: WBsf669443
      WBsf1001501
      WBsf1001502
      WBsf1020526
  Experimental_info: RNAi_result: WBRNAi00048885 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1019093
      Expr1152630
      Expr2004356
      Expr2022581
    Drives_construct: WBCnstr00031582
    Construct_product: WBCnstr00031582
    Microarray_results (17)
    Expression_cluster: WBPaper00031040:Cluster_6
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038438:D.coniospora_12hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
      WBPaper00042194:nhr-114(RNAi)_downregulated
      WBPaper00043945:MeHg_upregulated
      WBPaper00044736:oscillating_dev_expression
      WBPaper00044760:somatic_specific
      WBPaper00044786:emr-1(gk119)_upregulated
      WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_upregulated
      WBPaper00045257:bar-1(ga80)_downregulated
      WBPaper00045316:prg-1_upregulated_L4
      WBPaper00046012:tdp-1(ok803)_upregulated
      WBPaper00046121:ecdoderm_unique
      WBPaper00048611:MnCl2_upregulated
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00051352:Long-Term-Association-Memory_upregulated
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053388:dauer_regulated_Cluster3
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055013:hmg-3(bar24)_downregulated
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055941:atfs-1(et15)_upregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056169:rrf-3(pk1426)_downregulated_L4
      WBPaper00056330:glycine_downregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056826:SGP_biased
      WBPaper00057041:unc-70(cas983)_upregulated
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00058678:DAF-12_downregulated_PVD
      WBPaper00058948:PA14_downregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059328:mrps-5(RNAi)_downregulated_mRNA
      WBPaper00059567:olrn-1(ums9)_regulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059754:C.neoformans_H99_upregulated
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060445:ikb-1(nr2027)_downregulated_L4
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061007:S.aquatilis_upregulated
      WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:AMso
      WBPaper00061340:Anterior_arcade_cell
      WBPaper00061340:ant_arc_V
      WBPaper00061340:B
      WBPaper00061340:B_F_K_Kp_U_Y
      WBPaper00061340:CEPso
      WBPaper00061340:F_U
      WBPaper00061340:g1P
      WBPaper00061340:Glia
      WBPaper00061340:hyp1V_and_ant_arc_V
      WBPaper00061340:ILso
      WBPaper00061340:Neuroblast_ALA_RMED
      WBPaper00061340:Pharyngeal_intestinal_valve
      WBPaper00061340:pm1_pm2
      WBPaper00061340:rect_D
      WBPaper00061340:XXX
      WBPaper00061340:Y
      WBPaper00061341:28C_48h_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061527:bus-8_3160-K04H4.2_2324
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062440:crh-1(n3315)_downregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00062534:fat-P-80_downregulated
      WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
      WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-1-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_daf-16(mu86);glp-1(e2141)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
      WBPaper00065746:eat-2(ad1113)_downregulated
      WBPaper00065841:24_1
      WBPaper00065841:27_0
      WBPaper00065841:44_0
      WBPaper00065841:82_1
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      cgc4386_cluster_5_6
      WBPaper00024393:strongly_regulated_dauer_genes
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:24hr_muscle_depleted
      WBPaper00031003:hlh_1_enriched
      WBPaper00031003:total_muscle_depleted
      WBPaper00032948:FedUp
      WBPaper00034739:N2lessDR1350
      WBPaper00035227:heat_shock_regulated
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036286:Pattern_G
      WBPaper00038172:aak-2overexpression_down_regulated
      WBPaper00038304:octr-1_regulated
      WBPaper00041174:environmental
      WBPaper00041174:environmental_prime
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_EtBr-exposed_51h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
      WBPaper00045673:colistin_upregulated
      WBPaper00046548:dafachronic-acid_upregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
    Interaction: WBInteraction000410038
      WBInteraction000434429
  Map_info: Positive: Positive_clone: F57F5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 3.57469
  Method: Gene