WormBase Tree Display for Gene: WBGene00010191
expand all nodes | collapse all nodes | view schema
| WBGene00010191 | SMap | S_parent | Sequence | F57B7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dmsr-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F57B7.1 | ||||||||
| Molecular_name | F57B7.1a | ||||||||
| F57B7.1a.1 | |||||||||
| CE05989 | |||||||||
| F57B7.1b | |||||||||
| CE31009 | |||||||||
| F57B7.1b.1 | |||||||||
| Other_name | CELE_F57B7.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | dmsr-1 | ||||||||
| DB_info | Database | AceView | gene | 5L921 | |||||
| WormQTL | gene | WBGene00010191 | |||||||
| WormFlux | gene | WBGene00010191 | |||||||
| NDB | locus_tag | CELE_F57B7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010191|UniProtKB=Q20929 | |||||||
| family | PTHR46273 | ||||||||
| NCBI | gene | 186437 | |||||||
| RefSeq | protein | NM_171542.7 | |||||||
| NM_171541.7 | |||||||||
| SwissProt | UniProtAcc | Q20929 | |||||||
| TREEFAM | TREEFAM_ID | TF315509 | |||||||
| UniProt_GCRP | UniProtAcc | Q20929 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 20 Dec 2011 16:46:04 | WBPerson2970 | Name_change | CGC_name | dmsr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dmsr | ||||||||
| Allele (49) | |||||||||
| Strain | WBStrain00029099 | ||||||||
| WBStrain00029100 | |||||||||
| WBStrain00050968 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (18) | |||||||||
| Ortholog (33) | |||||||||
| Paralog (187) | |||||||||
| Structured_description | Concise_description | dmsr-1 is a G-protein coupled peptide receptor, orthologous to human GPR142 (G protein-coupled receptor 142) and GPR139 (G protein-coupled receptor 139); is activated in vitro by FLP-13 peptides and is required in vivo for the somnogenic effects of flp-13; it is also required for sleep after exposures to heat or ultraviolet light, which cause cellular stress. | Paper_evidence | WBPaper00050831 | |||||
| Person_evidence | WBPerson507 | ||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 18 Apr 2017 00:00:00 | ||||||||
| Automated_description | Enables neuropeptide receptor activity. Involved in regulation of cellular response to heat and regulation of circadian sleep/wake cycle, sleep. Located in neuronal cell body membrane. Expressed in AIY; RID; and tail neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F57B7.1a | |||||||
| F57B7.1b | |||||||||
| Corresponding_transcript | F57B7.1a.1 | ||||||||
| F57B7.1b.1 | |||||||||
| Other_sequence | JI481709.1 | ||||||||
| BMC09285_1 | |||||||||
| JI169299.1 | |||||||||
| Dviv_isotig14910 | |||||||||
| Dviv_isotig14911 | |||||||||
| JI465334.1 | |||||||||
| Associated_feature | WBsf1001349 | ||||||||
| WBsf1001350 | |||||||||
| WBsf1020448 | |||||||||
| WBsf232502 | |||||||||
| WBsf232503 | |||||||||
| WBsf232504 | |||||||||
| WBsf232505 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033014 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015873 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048827 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13187 | ||||||||
| Expr1013910 | |||||||||
| Expr1034446 | |||||||||
| Expr1152582 | |||||||||
| Expr2010968 | |||||||||
| Expr2029206 | |||||||||
| Drives_construct | WBCnstr00031594 | ||||||||
| Construct_product | WBCnstr00031594 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (137) | |||||||||
| Interaction | WBInteraction000235680 | ||||||||
| WBInteraction000269670 | |||||||||
| WBInteraction000276681 | |||||||||
| WBInteraction000283534 | |||||||||
| WBInteraction000389883 | |||||||||
| WBInteraction000411119 | |||||||||
| Map_info | Map | V | Position | 3.10351 | |||||
| Positive | Positive_clone | F57B7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031385 | ||||||||
| WBPaper00050831 | |||||||||
| WBPaper00065757 | |||||||||
| WBPaper00065946 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
