WormBase Tree Display for Gene: WBGene00010141
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WBGene00010141 | SMap | S_parent | Sequence | F56A8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F56A8.5 | |||||||
Molecular_name | F56A8.5 | ||||||||
F56A8.5.1 | |||||||||
CE16125 | |||||||||
F56A8.5.2 | |||||||||
Other_name | CELE_F56A8.5 | Accession_evidence | NDB | BX284603 | |||||
Public_name | F56A8.5 | ||||||||
DB_info | Database | AceView | gene | 3O357 | |||||
WormQTL | gene | WBGene00010141 | |||||||
WormFlux | gene | WBGene00010141 | |||||||
NDB | locus_tag | CELE_F56A8.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010141|UniProtKB=O45576 | |||||||
family | PTHR21503 | ||||||||
NCBI | gene | 186356 | |||||||
RefSeq | protein | NM_067332.9 | |||||||
TREEFAM | TREEFAM_ID | TF319645 | |||||||
TrEMBL | UniProtAcc | O45576 | |||||||
UniProt_GCRP | UniProtAcc | O45576 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (15) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP3772 | ||||||||
Ortholog (16) | |||||||||
Paralog (57) | |||||||||
Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. | Paper_evidence | WBPaper00012854 | |||||
Curator_confirmed | WBPerson567 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Enriched in several structures, including ABalapaaaa; ABalappapa; AFD; GLR; and germ line based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including sir-2.1; clk-1; and lin-35 based on microarray and RNA-seq studies. Is affected by twelve chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: F-box associated and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F56A8.5 | |||||||
Corresponding_transcript | F56A8.5.1 | ||||||||
F56A8.5.2 | |||||||||
Other_sequence | CBC04606_1 | ||||||||
Associated_feature | WBsf645697 | ||||||||
WBsf225977 | |||||||||
Experimental_info | RNAi_result | WBRNAi00015776 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00006281 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048622 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1017008 | ||||||||
Expr1034432 | |||||||||
Expr1152390 | |||||||||
Expr2004268 | |||||||||
Expr2022490 | |||||||||
Drives_construct | WBCnstr00031634 | ||||||||
Construct_product | WBCnstr00031634 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (101) | |||||||||
Interaction (23) | |||||||||
Map_info | Positive | Positive_clone | F56A8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 21.1639 | |||||||
Reference | WBPaper00012854 | ||||||||
Method | Gene |