WormBase Tree Display for Gene: WBGene00010130

WBGene00010130 SMap: S_parent: Sequence: F55H2
  Identity: Version: 2
    Name: CGC_name: vha-14
      Sequence_name: F55H2.2
      Molecular_name: F55H2.2
        F55H2.2.1
        CE00209
      Other_name: CELE_F55H2.2 Accession_evidence: NDB BX284603
      Public_name: vha-14
    DB_info: Database: AceView gene 3K599
        WormQTL gene WBGene00010130
        WormFlux gene WBGene00010130
        NDB locus_tag CELE_F55H2.2
        Panther gene CAEEL|WormBase=WBGene00010130|UniProtKB=P34462
          family PTHR11671
        NCBI gene 176338
        RefSeq protein NM_066693.7
        SwissProt UniProtAcc P34462
        TREEFAM TREEFAM_ID TF300160
        UniProt_GCRP UniProtAcc P34462
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 Jul 2004 16:03:37 WBPerson1971 Name_change: CGC_name: vha-14
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vha
    Allele (15)
    Strain: WBStrain00049367
      WBStrain00051765
      WBStrain00051767
    RNASeq_FPKM (74)
    GO_annotation: 00042489
      00042490
      00042491
      00042492
      00042493
      00042494
      00042495
      00117605
    Contained_in_operon: CEOP3880
    Ortholog (38)
    Structured_description: Concise_description: vha-14 encodes an ortholog of subunit D of the cytoplasmic (V1) domainof vacuolar proton-translocating ATPase (V-ATPase); VHA-14 is apredicted cytosolic rotor (stalk) component. Paper_evidence: WBPaper00026649
            WBPaper00028773
            WBPaper00028774
            WBPaper00028775
          Curator_confirmed: WBPerson567
          Date_last_updated: 19 Nov 2006 00:00:00
      Automated_description: Predicted to enable proton-transporting ATPase activity, rotational mechanism. Predicted to contribute to P-type proton-exporting transporter activity. Predicted to be involved in regulation of intracellular pH. Predicted to be part of proton-transporting V-type ATPase complex. Is an ortholog of human ATP6V1D (ATPase H+ transporting V1 subunit D). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F55H2.2
    Corresponding_transcript: F55H2.2.1
    Other_sequence (123)
    Associated_feature (17)
  Experimental_info: RNAi_result: WBRNAi00032908 Inferred_automatically: RNAi_primary
      WBRNAi00085609 Inferred_automatically: RNAi_primary
      WBRNAi00106928 Inferred_automatically: RNAi_primary
      WBRNAi00002587 Inferred_automatically: RNAi_primary
      WBRNAi00048566 Inferred_automatically: RNAi_primary
      WBRNAi00015756 Inferred_automatically: RNAi_primary
      WBRNAi00111096 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014895
      Expr1034426
      Expr1152354
      Expr2017980
      Expr2036116
    Drives_construct: WBCnstr00031643
    Construct_product: WBCnstr00031643
    Microarray_results (24)
    Expression_cluster (131)
    Interaction (107)
  Map_info: Map: III Position: 0.574798 Error: 0.000313
    Positive: Positive_clone: F55H2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00036659
    WBPaper00038491
    WBPaper00047389
    WBPaper00049828
    WBPaper00055090
    WBPaper00058870
    WBPaper00059755
    WBPaper00062341
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene