WormBase Tree Display for Gene: WBGene00010125
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WBGene00010125 | Evidence | Paper_evidence | WBPaper00005976 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | F55G11 | ||||||
Identity | Version | 2 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 4N731 | |||||
WormQTL | gene | WBGene00010125 | |||||||
WormFlux | gene | WBGene00010125 | |||||||
NDB | locus_tag | CELE_F55G11.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010125|UniProtKB=Q9XUE0 | |||||||
family | PTHR47155 | ||||||||
NCBI | gene | 178247 | |||||||
RefSeq | protein | NM_001268760.2 | |||||||
NM_001268761.3 | |||||||||
TREEFAM | TREEFAM_ID | TF316078 | |||||||
TrEMBL | UniProtAcc | D5MCV0 | |||||||
Q9XUE0 | |||||||||
UniProt_GCRP | UniProtAcc | Q9XUE0 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 25 Aug 2004 11:12:51 | WBPerson1971 | Name_change | CGC_name | dod-22 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dod | ||||||||
Allele (34) | |||||||||
Strain | WBStrain00032269 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00007684 | ||||||||
00101704 | |||||||||
00101705 | |||||||||
00101706 | |||||||||
Ortholog (72) | |||||||||
Paralog (35) | |||||||||
Structured_description | Automated_description | Involved in defense response to Gram-negative bacterium and innate immune response. Expressed in head neurons and rectal gland cell. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00015752 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00075952 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032903 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092237 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00063217 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048553 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr4726 | ||||||||
Expr1026572 | |||||||||
Expr1152337 | |||||||||
Expr2011018 | |||||||||
Expr2029255 | |||||||||
Drives_construct | WBCnstr00012203 | ||||||||
WBCnstr00031647 | |||||||||
Construct_product | WBCnstr00012203 | ||||||||
WBCnstr00014903 | |||||||||
WBCnstr00031647 | |||||||||
Microarray_results (19) | |||||||||
Expression_cluster (336) | |||||||||
Interaction (34) | |||||||||
Map_info | Map | IV | Position | 6.77332 | Error | 0.028651 | |||
Positive | Positive_clone | F55G11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (13) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |