WormBase Tree Display for Gene: WBGene00010101

WBGene00010101 SMap: S_parent: Sequence: F55C9
  Identity: Version: 2
    Name: CGC_name: fbxb-57 Person_evidence: WBPerson655
      Sequence_name: F55C9.4
      Molecular_name: F55C9.4
        F55C9.4.1
        CE18736
      Other_name: CELE_F55C9.4 Accession_evidence: NDB BX284605
      Public_name: fbxb-57
    DB_info: Database: AceView gene 5T763
        WormQTL gene WBGene00010101
        WormFlux gene WBGene00010101
        NDB locus_tag CELE_F55C9.4
        Panther gene CAEEL|WormBase=WBGene00010101|UniProtKB=Q9XUZ4
          family PTHR22899
        NCBI gene 186292
        RefSeq protein NM_075352.3
        TrEMBL UniProtAcc Q9XUZ4
        UniProt_GCRP UniProtAcc Q9XUZ4
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:51 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Dec 2005 17:22:20 WBPerson2970 Name_change: CGC_name: fbxb-57
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxb
    Allele (46)
    RNASeq_FPKM (74)
    Ortholog: chrV_pilon.g17855 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (143)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in ABplpapapa; ABprpapapa; G2; and W cell based on single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and tph-1 based on tiling array; RNA-seq; and microarray studies. Is affected by eleven chemicals including methylmercuric chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F55C9.4
    Corresponding_transcript: F55C9.4.1
    Associated_feature: WBsf647706
      WBsf1003203
      WBsf1003204
      WBsf1021710
      WBsf1021711
  Experimental_info: RNAi_result: WBRNAi00032873 Inferred_automatically: RNAi_primary
      WBRNAi00015718 Inferred_automatically: RNAi_primary
      WBRNAi00048485 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027623
      Expr1034412
      Expr1152277
      Expr2011658
      Expr2029897
    Drives_construct: WBCnstr00031667
    Construct_product: WBCnstr00031667
    Microarray_results (15)
    Expression_cluster (107)
    Interaction (214)
  Map_info: Map: V Position: 20.8981 Error: 0.017067
    Positive: Positive_clone: F55C9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene