WormBase Tree Display for Gene: WBGene00010045
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| WBGene00010045 | SMap | S_parent | Sequence | F54C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F54C9.11 | |||||||
| Molecular_name | F54C9.11 | ||||||||
| F54C9.11.1 | |||||||||
| CE47974 | |||||||||
| Other_name | CELE_F54C9.11 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F54C9.11 | ||||||||
| DB_info | Database | AceView | gene | 2I874 | |||||
| WormQTL | gene | WBGene00010045 | |||||||
| WormFlux | gene | WBGene00010045 | |||||||
| NDB | locus_tag | CELE_F54C9.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010045|UniProtKB=Q20759 | |||||||
| family | PTHR14430 | ||||||||
| NCBI | gene | 186226 | |||||||
| RefSeq | protein | NM_063416.5 | |||||||
| TREEFAM | TREEFAM_ID | TF313748 | |||||||
| TrEMBL | UniProtAcc | Q20759 | |||||||
| UniProt_GCRP | UniProtAcc | Q20759 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00069054 | ||||||||
| 00069055 | |||||||||
| 00069056 | |||||||||
| 00069057 | |||||||||
| 00069058 | |||||||||
| 00117538 | |||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in exocytosis. Predicted to be located in Golgi to plasma membrane transport vesicle. Expressed in hypodermis; vulA; vulB1; vulB2; and vulval muscle. Is an ortholog of human RAB3IL1 (RAB3A interacting protein like 1) and RAB3IP (RAB3A interacting protein). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54C9.11 | |||||||
| Corresponding_CDS_history | F54C9.11:wp197 | ||||||||
| Corresponding_transcript | F54C9.11.1 | ||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf650342 | ||||||||
| WBsf655379 | |||||||||
| WBsf717016 | |||||||||
| WBsf988772 | |||||||||
| WBsf988773 | |||||||||
| WBsf1012713 | |||||||||
| WBsf1012714 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015590 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048269 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032762 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr127 | ||||||||
| Expr4239 | |||||||||
| Expr4240 | |||||||||
| Expr1027753 | |||||||||
| Expr1034378 | |||||||||
| Expr1152070 | |||||||||
| Expr2004126 | |||||||||
| Expr2022350 | |||||||||
| Drives_construct | WBCnstr00011848 | ||||||||
| WBCnstr00011850 | |||||||||
| Construct_product | WBCnstr00011848 | ||||||||
| WBCnstr00011850 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (147) | |||||||||
| Interaction | WBInteraction000029726 | ||||||||
| WBInteraction000032159 | |||||||||
| WBInteraction000032160 | |||||||||
| WBInteraction000161465 | |||||||||
| WBInteraction000224820 | |||||||||
| WBInteraction000276290 | |||||||||
| WBInteraction000374927 | |||||||||
| WBInteraction000374928 | |||||||||
| WBInteraction000384326 | |||||||||
| WBInteraction000387931 | |||||||||
| WBInteraction000405380 | |||||||||
| WBInteraction000412945 | |||||||||
| WBInteraction000508063 | |||||||||
| WBInteraction000515260 | |||||||||
| WBInteraction000515261 | |||||||||
| WBInteraction000515264 | |||||||||
| WBInteraction000515265 | |||||||||
| WBInteraction000515268 | |||||||||
| WBInteraction000516000 | |||||||||
| WBInteraction000544330 | |||||||||
| WBInteraction000546019 | |||||||||
| WBInteraction000546041 | |||||||||
| WBInteraction000547340 | |||||||||
| WBInteraction000547795 | |||||||||
| WBInteraction000548266 | |||||||||
| WBInteraction000548267 | |||||||||
| WBInteraction000569845 | |||||||||
| WBInteraction000569846 | |||||||||
| WBInteraction000571197 | |||||||||
| Map_info | Positive | Positive_clone | F54C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.823109 | |||||||
| Reference | WBPaper00027637 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064057 | |||||||||
| Method | Gene |
