WormBase Tree Display for Gene: WBGene00010042
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| WBGene00010042 | SMap | S_parent | Sequence | F54C9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bcs-1 | Person_evidence | WBPerson4034 | |||||
| Sequence_name | F54C9.6 | ||||||||
| Molecular_name | F54C9.6 | ||||||||
| F54C9.6.1 | |||||||||
| CE02256 | |||||||||
| F54C9.6.2 | |||||||||
| F54C9.6.3 | |||||||||
| Other_name | CELE_F54C9.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | bcs-1 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00010042 | |||||
| WormFlux | gene | WBGene00010042 | |||||||
| NDB | locus_tag | CELE_F54C9.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010042|UniProtKB=Q20755 | |||||||
| family | PTHR23070 | ||||||||
| NCBI | gene | 174372 | |||||||
| RefSeq | protein | NM_001027020.5 | |||||||
| TrEMBL | UniProtAcc | Q20755 | |||||||
| UniProt_GCRP | UniProtAcc | Q20755 | |||||||
| OMIM | gene | 603647 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 25 Jul 2008 14:36:54 | WBPerson2970 | Name_change | CGC_name | bcs-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bcs | ||||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00069009 | ||||||||
| 00069010 | |||||||||
| 00069011 | |||||||||
| 00069012 | |||||||||
| 00069013 | |||||||||
| 00069014 | |||||||||
| 00069015 | |||||||||
| 00117536 | |||||||||
| 00117537 | |||||||||
| Contained_in_operon | CEOP2364 | ||||||||
| Ortholog (36) | |||||||||
| Structured_description | Concise_description | F54C9.6 encodes a protein orthologous to the human mitochondrial protein BCS1 (YEAST HOMOLOG)-LIKE (BCS1L; OMIM:603647); mutation of BCS1L leads to neonatal tubulopathy, encephalopathy, and liver failure, or to GRACILE syndrome. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 06 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in mitochondrial respiratory chain complex III assembly and protein insertion into mitochondrial inner membrane from matrix. Predicted to be located in mitochondrial inner membrane. Human ortholog(s) of this gene implicated in Bjornstad syndrome; GRACILE syndrome; and mitochondrial complex III deficiency nuclear type 1. Is an ortholog of human BCS1L (BCS1 homolog, ubiquinol-cytochrome c reductase complex chaperone). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111455 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1020) | ||||
| DOID:0050677 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1020) | ||||||
| DOID:0080111 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1020) | ||||||
| Molecular_info | Corresponding_CDS | F54C9.6 | |||||||
| Corresponding_CDS_history | F54C9.6b:wp270 | ||||||||
| Corresponding_transcript | F54C9.6.1 | ||||||||
| F54C9.6.2 | |||||||||
| F54C9.6.3 | |||||||||
| Other_sequence (36) | |||||||||
| Associated_feature | WBsf988767 | ||||||||
| WBsf1012711 | |||||||||
| WBsf221772 | |||||||||
| WBsf221773 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00008218 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00008851 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032767 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00048274 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025622 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071184 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022245 | ||||||||
| Expr1034376 | |||||||||
| Expr1152076 | |||||||||
| Expr2009587 | |||||||||
| Expr2027824 | |||||||||
| Drives_construct | WBCnstr00031714 | ||||||||
| Construct_product | WBCnstr00031714 | ||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (87) | |||||||||
| Map_info | Map | II | Position | 0.818767 | Error | 0.000449 | |||
| Positive | Positive_clone | F54C9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00036249 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
