WormBase Tree Display for Gene: WBGene00010033
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WBGene00010033 | SMap | S_parent | Sequence | F54B11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F54B11.10 | |||||||
Molecular_name | F54B11.10 | ||||||||
F54B11.10.1 | |||||||||
CE05934 | |||||||||
Other_name | CELE_F54B11.10 | Accession_evidence | NDB | BX284606 | |||||
Public_name | F54B11.10 | ||||||||
DB_info | Database | AceView | gene | XO197 | |||||
WormQTL | gene | WBGene00010033 | |||||||
WormFlux | gene | WBGene00010033 | |||||||
NDB | locus_tag | CELE_F54B11.10 | |||||||
NCBI | gene | 186217 | |||||||
RefSeq | protein | NM_077870.2 | |||||||
TrEMBL | UniProtAcc | Q20738 | |||||||
UniProt_GCRP | UniProtAcc | Q20738 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (19) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00029474 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
OrthoMCL | |||||||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00147609 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00121258 | Caenorhabditis japonica | From_analysis | OMA | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
CSP21.g8354 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
CSP26.g7889 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP29.g5233 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP31.g13725 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP32.g11588 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
CSP38.g10851 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
CSP39.g16406 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP39.g27688 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
Cang_2012_03_13_00160.g5912 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
Cni-F54B11.10 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Pan_g14596 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
Sp34_X0125000 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrX_pilon.g20441 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABalppppapa; ABplaapaaa; NSM; PLM; and amphid neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including rrf-3; pmk-1; and sek-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-one chemicals including methylmercury hydroxide; 1-methylnicotinamide; and manganese chloride based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F54B11.10 | |||||||
Corresponding_transcript | F54B11.10.1 | ||||||||
Associated_feature | WBsf648681 | ||||||||
WBsf663493 | |||||||||
WBsf1007654 | |||||||||
WBsf1007655 | |||||||||
WBsf236585 | |||||||||
Experimental_info | RNAi_result | WBRNAi00015563 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032734 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00048217 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1016021 | ||||||||
Expr1034368 | |||||||||
Expr1152023 | |||||||||
Expr2004106 | |||||||||
Expr2022331 | |||||||||
Drives_construct | WBCnstr00031723 | ||||||||
Construct_product | WBCnstr00031723 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (153) | |||||||||
Interaction (26) | |||||||||
Map_info | Positive | Positive_clone | F54B11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | 13.6766 | |||||||
Reference | WBPaper00065106 | ||||||||
Method | Gene |