WormBase Tree Display for Gene: WBGene00010030
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| WBGene00010030 | SMap | S_parent | Sequence | F54B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F54B11.7 | |||||||
| Molecular_name | F54B11.7 | ||||||||
| F54B11.7.1 | |||||||||
| CE05931 | |||||||||
| Other_name | CELE_F54B11.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F54B11.7 | ||||||||
| DB_info | Database | AceView | gene | XO219 | |||||
| WormQTL | gene | WBGene00010030 | |||||||
| WormFlux | gene | WBGene00010030 | |||||||
| NDB | locus_tag | CELE_F54B11.7 | |||||||
| NCBI | gene | 186214 | |||||||
| RefSeq | protein | NM_077877.2 | |||||||
| TREEFAM | TREEFAM_ID | TF342663 | |||||||
| TrEMBL | UniProtAcc | Q20742 | |||||||
| UniProt_GCRP | UniProtAcc | Q20742 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (29) | |||||||||
| Strain | WBStrain00037913 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00073785 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | |||||
| chrX_pilon.g20448 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00009021 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00011812 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00013954 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in I5 neuron based on single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and eat-2 based on tiling array; RNA-seq; and microarray studies. Is affected by six chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54B11.7 | |||||||
| Corresponding_transcript | F54B11.7.1 | ||||||||
| Associated_feature | WBsf1007662 | ||||||||
| WBsf1007663 | |||||||||
| WBsf1007664 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00032739 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048225 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015570 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027127 | ||||||||
| Expr1152030 | |||||||||
| Expr2004110 | |||||||||
| Expr2022335 | |||||||||
| Drives_construct | WBCnstr00031726 | ||||||||
| Construct_product | WBCnstr00031726 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (27) | |||||||||
| SAGE_tag | SAGE:ccactgaaaa | Strand | Sense | ||||||
| Unambiguously_mapped | |||||||||
| SAGE:gctcacgtggagtgccc | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:ttggtgtcggtgtgctg | Strand | Antisense | |||||||
| SAGE:gttgtttctc | Strand | Antisense | |||||||
| Interaction (19) | |||||||||
| Map_info | Positive | Positive_clone | F54B11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 13.883 | |||||||
| Method | Gene |
