WormBase Tree Display for Gene: WBGene00010028

WBGene00010028 SMap: S_parent: Sequence: F54B11
  Identity: Version: 1
    Name: Sequence_name: F54B11.5
      Molecular_name: F54B11.5
        F54B11.5.1
        CE05929
      Other_name: CELE_F54B11.5 Accession_evidence: NDB BX284606
      Public_name: F54B11.5
    DB_info: Database: AceView gene XO214
        WormQTL gene WBGene00010028
        WormFlux gene WBGene00010028
        NDB locus_tag CELE_F54B11.5
        Panther gene CAEEL|WormBase=WBGene00010028|UniProtKB=Q20737
          family PTHR12109
        NCBI gene 186213
        RefSeq protein NM_077875.4
        TREEFAM TREEFAM_ID TF323284
        TrEMBL UniProtAcc Q20737
        UniProt_GCRP UniProtAcc Q20737
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (35)
    RNASeq_FPKM (74)
    GO_annotation: 00068929
    Ortholog: WBGene00065280 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00029468 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00157733 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00110134 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      CBOVI.g3381 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g7894 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g11791 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g13769 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11649 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11824 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g14740 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g27639 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17503 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00155.g5785 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-F54B11.5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g22057 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01402.g20699 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01594 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_025738 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_X0124800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g20446 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00260876 Strongyloides ratti From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-040625-71 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:21159 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1914400 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1303154 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable metal ion binding activity. Is an ortholog of human RNF141 (ring finger protein 141). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F54B11.5
    Corresponding_transcript: F54B11.5.1
    Other_sequence: CRC04154_1
      FD516047.1
      CSC01364_1
      TDC01385_1
      CR04612
      BU087580.1
      NAC01802_1
      CB037575.1
    Associated_feature: WBsf654534
      WBsf238149
  Experimental_info: RNAi_result: WBRNAi00015568 Inferred_automatically: RNAi_primary
      WBRNAi00095201 Inferred_automatically: RNAi_primary
      WBRNAi00094761 Inferred_automatically: RNAi_primary
      WBRNAi00032737 Inferred_automatically: RNAi_primary
      WBRNAi00048223 Inferred_automatically: RNAi_primary
      WBRNAi00076471 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010730
      Expr1034367
      Expr1152028
      Expr2004109
      Expr2022334
    Drives_construct: WBCnstr00031727
    Construct_product: WBCnstr00031727
    Microarray_results (18)
    Expression_cluster (141)
    Interaction: WBInteraction000428236
      WBInteraction000539908
      WBInteraction000542687
      WBInteraction000544320
      WBInteraction000550967
      WBInteraction000555284
  Map_info: Positive: Positive_clone: F54B11 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 13.8015
  Reference: WBPaper00027315
    WBPaper00038491
    WBPaper00041771
    WBPaper00055090
    WBPaper00063170
  Method: Gene