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WormBase Tree Display for Gene: WBGene00010021

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Name Class

WBGene00010021SMapS_parentSequenceF54B8
IdentityVersion2
NameCGC_namesrbc-49Person_evidenceWBPerson522
Sequence_nameF54B8.7
Molecular_nameF54B8.7a
F54B8.7a.1
CE38075
F54B8.7b
CE38076
F54B8.7b.1
Other_nameCELE_F54B8.7Accession_evidenceNDBBX284605
Public_namesrbc-49
DB_infoDatabaseAceViewgene5Q301
WormQTLgeneWBGene00010021
WormFluxgeneWBGene00010021
NDBlocus_tagCELE_F54B8.7
PanthergeneCAEEL|WormBase=WBGene00010021|UniProtKB=O45564
familyPTHR46418
NCBIgene186204
RefSeqproteinNM_001028796.1
NM_001028795.1
TREEFAMTREEFAM_IDTF315371
TrEMBLUniProtAccQ5CZ32
O45564
UniProt_GCRPUniProtAccO45564
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
203 Feb 2005 11:21:21WBPerson2970Name_changeCGC_namesrbc-49
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsrbc
Allele (27)
RNASeq_FPKM (74)
GO_annotation00034787
Ortholog (16)
Paralog (124)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF54B8.7a
F54B8.7b
Corresponding_CDS_historyF54B8.7:wp139
Corresponding_transcriptF54B8.7a.1
F54B8.7b.1
Experimental_infoRNAi_resultWBRNAi00015581Inferred_automaticallyRNAi_primary
WBRNAi00032744Inferred_automaticallyRNAi_primary
WBRNAi00048240Inferred_automaticallyRNAi_primary
Expr_patternExpr1152046
Expr2034434
Drives_constructWBCnstr00031733
Construct_productWBCnstr00031733
Microarray_results (17)
Expression_cluster (17)
SAGE_tagSAGE:aattcacagtStrandAntisense
SAGE:aattcacagtgcacttgStrandAntisense
SAGE:actgttatttStrandSense
Unambiguously_mapped
Interaction (83)
Map_infoMapVPosition8.96523
PositivePositive_cloneF54B8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene