WormBase Tree Display for Gene: WBGene00010015
expand all nodes | collapse all nodes | view schema
| WBGene00010015 | SMap | S_parent | Sequence | F54B3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | atad-3 | Person_evidence | WBPerson74 | |||||
| Sequence_name | F54B3.3 | ||||||||
| Molecular_name | F54B3.3 | ||||||||
| F54B3.3.1 | |||||||||
| CE35878 | |||||||||
| Other_name | CELE_F54B3.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | atad-3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 May 2009 08:50:11 | WBPerson9133 | Name_change | CGC_name | atad-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | atad | ||||||||
| Allele (37) | |||||||||
| Strain | WBStrain00037299 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Contained_in_operon | CEOP2714 | ||||||||
| Ortholog (24) | |||||||||
| Structured_description | Concise_description | atad-3 encodes the ortholog of the vertebrate mitochondrial protein ATAD3; both vertebrate and elegans ATAD-3 contain the conserved AAA (ATPases associated with a variety of cellular activities) domain; atad-3 is required for normal mitochondrial morphology and activity as atad-3 mutants show reduced complex I and citrate synthase activities; atad-3 is also required for embryonic and larval development; ATAD-3 localizes to mitochondria. | Paper_evidence | WBPaper00035437 | |||||
| WBPaper00036409 | |||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 04 May 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP binding activity and ATP hydrolysis activity. Involved in mitochondrion organization. Located in mitochondrion. Is an ortholog of human ATAD3A (ATPase family AAA domain containing 3A) and ATAD3B (ATPase family AAA domain containing 3B). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081396 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25567) | ||||
| DOID:0081395 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:25567) | ||||||
| Molecular_info | Corresponding_CDS | F54B3.3 | |||||||
| Corresponding_CDS_history | F54B3.3:wp111 | ||||||||
| Corresponding_transcript | F54B3.3.1 | ||||||||
| Other_sequence (90) | |||||||||
| Associated_feature | WBsf654912 | ||||||||
| WBsf981257 | |||||||||
| WBsf989294 | |||||||||
| WBsf1012996 | |||||||||
| WBsf221988 | |||||||||
| WBsf221989 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr8839 | ||||||||
| Expr1014935 | |||||||||
| Expr1034366 | |||||||||
| Expr1152035 | |||||||||
| Expr2009476 | |||||||||
| Expr2027713 | |||||||||
| Drives_construct | WBCnstr00031739 | ||||||||
| Construct_product | WBCnstr00031739 | ||||||||
| Antibody | WBAntibody00002055 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (159) | |||||||||
| Interaction (136) | |||||||||
| Map_info | Map | II | Position | 2.34582 | Error | 0.004043 | |||
| Positive | Positive_clone | F54B3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035437 | ||||||||
| WBPaper00036249 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00040635 | |||||||||
| WBPaper00048855 | |||||||||
| WBPaper00049959 | |||||||||
| WBPaper00050464 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065799 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
