WormBase Tree Display for Gene: WBGene00010001
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WBGene00010001 | SMap | S_parent | Sequence | F53F8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F53F8.4 | |||||||
Molecular_name | F53F8.4 | ||||||||
F53F8.4.1 | |||||||||
CE17858 | |||||||||
Other_name | CELE_F53F8.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | F53F8.4 | ||||||||
DB_info | Database | AceView | gene | 5V160 | |||||
WormQTL | gene | WBGene00010001 | |||||||
WormFlux | gene | WBGene00010001 | |||||||
NDB | locus_tag | CELE_F53F8.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010001|UniProtKB=O62261 | |||||||
family | PTHR46705 | ||||||||
NCBI | gene | 186181 | |||||||
RefSeq | protein | NM_075596.4 | |||||||
TREEFAM | TREEFAM_ID | TF315483 | |||||||
TrEMBL | UniProtAcc | O62261 | |||||||
UniProt_GCRP | UniProtAcc | O62261 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (25) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (26) | |||||||||
Paralog (18) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABplapaaapa; ABprapaaapa; AIZ; germline precursor cell; and intestine based on tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty chemicals including rotenone; D-glucose; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: DB module; Phosphorylation site; and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00032708 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048163 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00015535 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1021866 | ||||||||
Expr1151975 | |||||||||
Expr2004085 | |||||||||
Expr2022309 | |||||||||
Drives_construct | WBCnstr00031749 | ||||||||
Construct_product | WBCnstr00031749 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (225) | |||||||||
Interaction | WBInteraction000566130 | ||||||||
WBInteraction000576172 | |||||||||
WBInteraction000580682 | |||||||||
Map_info | Positive | Positive_clone | F53F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 25.0352 | |||||||
Method | Gene |