WormBase Tree Display for Gene: WBGene00009949
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| WBGene00009949 | SMap | S_parent | Sequence | F53A2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | F53A2.1 | |||||||
| Molecular_name | F53A2.1 | ||||||||
| F53A2.1.1 | |||||||||
| CE44354 | |||||||||
| Other_name | CELE_F53A2.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | F53A2.1 | ||||||||
| DB_info | Database | AceView | gene | 3O410 | |||||
| 3O408 | |||||||||
| WormQTL | gene | WBGene00009949 | |||||||
| WormFlux | gene | WBGene00009949 | |||||||
| NDB | locus_tag | CELE_F53A2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009949|UniProtKB=O45546 | |||||||
| family | PTHR37431 | ||||||||
| NCBI | gene | 186137 | |||||||
| RefSeq | protein | NM_067345.3 | |||||||
| TREEFAM | TREEFAM_ID | TF352450 | |||||||
| TrEMBL | UniProtAcc | O45546 | |||||||
| UniProt_GCRP | UniProtAcc | O45546 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Nov 2009 13:20:50 | WBPerson1983 | Event | Split_into | WBGene00194870 | ||||
| Split_into | WBGene00194870 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034756 | ||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00018418 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00022827 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WBGene00022720 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021668 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00013155 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| WBGene00021526 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53A2.1 | |||||||
| Corresponding_CDS_history | F53A2.1:wp59 | ||||||||
| F53A2.1:wp209 | |||||||||
| Corresponding_transcript | F53A2.1.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf667575 | ||||||||
| WBsf994852 | |||||||||
| WBsf994853 | |||||||||
| WBsf1016353 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015448 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1021504 | ||||||||
| Expr1151854 | |||||||||
| Expr2004019 | |||||||||
| Expr2022241 | |||||||||
| Microarray_results | SMD_F53A2.1 | ||||||||
| GPL14144_F53A2.1_555-614_0.784_89_B | |||||||||
| GPL14144_F53A2.1_631-690_0.785_87_C | |||||||||
| GPL14144_F53A2.1_841-900_0.835_45_A | |||||||||
| GPL19516_CGZ0023283 | |||||||||
| GPL21109_F53A2.1 | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction | WBInteraction000543371 | ||||||||
| Map_info | Positive | Positive_clone | F53A2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 21.2102 | |||||||
| Method | Gene |
