WormBase Tree Display for Gene: WBGene00009940
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| WBGene00009940 | SMap | S_parent | Sequence | F52F12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | strl-1 | Person_evidence | WBPerson6837 | |||||
| Sequence_name | F52F12.7 | ||||||||
| Molecular_name | F52F12.7a | ||||||||
| F52F12.7a.1 | |||||||||
| CE42711 | |||||||||
| F52F12.7b | |||||||||
| CE10852 | |||||||||
| F52F12.7b.1 | |||||||||
| Other_name | CELE_F52F12.7 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | strl-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 12 Apr 2012 16:34:57 | WBPerson2970 | Name_change | CGC_name | strl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | strl | ||||||||
| Allele (24) | |||||||||
| Strain | WBStrain00037510 | ||||||||
| In_cluster | conserved_miRNA_siRNA_cluster | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00030887 | ||||||||
| 00030888 | |||||||||
| 00030889 | |||||||||
| 00030890 | |||||||||
| 00117496 | |||||||||
| Ortholog (44) | |||||||||
| Paralog | WBGene00012127 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00010505 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017826 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | F52F12.7 is orthologous to the human gene STEROIDOGENIC ACUTE REGULATORY PROTEIN (STAR; OMIM:600617), which when mutated leads to disease. | Curator_confirmed | WBPerson1823 | |||||
| WBPerson567 | |||||||||
| Date_last_updated | 06 Aug 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable lipid binding activity. Predicted to be involved in vesicle tethering to endoplasmic reticulum. Predicted to be located in endoplasmic reticulum membrane; endoplasmic reticulum-endosome membrane contact site; and late endosome membrane. Human ortholog(s) of this gene implicated in congenital adrenal hyperplasia. Is an ortholog of human STAR (steroidogenic acute regulatory protein). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050811 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11359) | ||||
| Molecular_info | Corresponding_CDS | F52F12.7a | |||||||
| F52F12.7b | |||||||||
| Corresponding_CDS_history | F52F12.7:wp192 | ||||||||
| Corresponding_transcript | F52F12.7a.1 | ||||||||
| F52F12.7b.1 | |||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf655797 | ||||||||
| WBsf656811 | |||||||||
| WBsf656812 | |||||||||
| WBsf218372 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048013 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032633 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028193 | ||||||||
| Expr1034331 | |||||||||
| Expr1151828 | |||||||||
| Expr2017097 | |||||||||
| Expr2035233 | |||||||||
| Drives_construct | WBCnstr00031799 | ||||||||
| Construct_product | WBCnstr00031799 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction | WBInteraction000264141 | ||||||||
| WBInteraction000354274 | |||||||||
| WBInteraction000373343 | |||||||||
| WBInteraction000420659 | |||||||||
| WBInteraction000459459 | |||||||||
| WBInteraction000461309 | |||||||||
| Map_info | Map | I | Position | 4.06833 | |||||
| Positive | Positive_clone | F52F12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00048210 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057279 | |||||||||
| WBPaper00064789 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
