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WormBase Tree Display for Gene: WBGene00009902

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Name Class

WBGene00009902SMapS_parentSequenceF49E12
IdentityVersion2
NameCGC_namedrd-1Person_evidenceWBPerson10050
Sequence_nameF49E12.9
Molecular_nameF49E12.9a
F49E12.9a.1
CE03385
F49E12.9b
CE40961
F49E12.9b.1
F49E12.9c
Other_nameCELE_F49E12.9Accession_evidenceNDBBX284602
Public_namedrd-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
229 Apr 2015 12:07:40WBPerson2970Name_changeCGC_namedrd-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdrd
Allele (25)
Strain (2)
RNASeq_FPKM (74)
GO_annotation00004671
00004672
00004673
00004674
00117458
00117459
00117460
Ortholog (32)
ParalogWBGene00009903Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00018036Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to enable C-4 methylsterol oxidase activity. Predicted to be involved in sterol biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Is an ortholog of human FAXDC2 (fatty acid hydroxylase domain containing 2).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF49E12.9a
F49E12.9b
Corresponding_transcriptF49E12.9c
F49E12.9a.1
F49E12.9b.1
Other_sequence (18)
Associated_featureWBsf644461
WBsf717731
WBsf988720
WBsf221736
WBsf221737
Experimental_infoRNAi_resultWBRNAi00090585Inferred_automaticallyRNAi_primary
WBRNAi00032543Inferred_automaticallyRNAi_primary
WBRNAi00092590Inferred_automaticallyRNAi_primary
WBRNAi00015324Inferred_automaticallyRNAi_primary
WBRNAi00047858Inferred_automaticallyRNAi_primary
Expr_patternExpr6126
Expr1029194
Expr1151691
Expr2011084
Expr2029320
Drives_constructWBCnstr00002668
WBCnstr00031829
Construct_productWBCnstr00031829
Microarray_results (26)
Expression_cluster (240)
InteractionWBInteraction000039127
WBInteraction000039128
WBInteraction000107405
WBInteraction000144457
WBInteraction000171562
WBInteraction000210014
WBInteraction000224598
WBInteraction000236877
WBInteraction000238737
WBInteraction000248207
WBInteraction000248212
WBInteraction000258813
WBInteraction000285879
WBInteraction000293383
WBInteraction000304739
WBInteraction000305394
WBInteraction000307168
WBInteraction000310923
WBInteraction000330935
WBInteraction000346516
WBInteraction000363025
WBInteraction000379601
WBInteraction000387569
WBInteraction000388803
WBInteraction000394112
WBInteraction000400853
WBInteraction000405753
WBInteraction000413577
WBInteraction000418153
WBInteraction000418235
WBInteraction000419629
WBInteraction000426507
WBInteraction000439228
WBInteraction000444975
WBInteraction000446809
WBInteraction000457876
WBInteraction000460960
WBInteraction000467676
WBInteraction000467810
Map_infoMapIIPosition0.768222
PositivePositive_cloneF49E12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00042257
WBPaper00044557
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene