WormBase Tree Display for Gene: WBGene00009887
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WBGene00009887 | SMap | S_parent | Sequence | F49E2 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | glb-17 | Paper_evidence | WBPaper00031066 | |||
Person_evidence | WBPerson1540 | ||||||
Sequence_name | F49E2.4 | ||||||
Molecular_name | F49E2.4a | ||||||
F49E2.4a.1 | |||||||
CE01012 | |||||||
F49E2.4b | |||||||
CE44201 | |||||||
F49E2.4a.2 | |||||||
F49E2.4b.1 | |||||||
F49E2.4b.2 | |||||||
Other_name | CELE_F49E2.4 | Accession_evidence | NDB | BX284606 | |||
Public_name | glb-17 | ||||||
DB_info | Database | AceView | gene | XK192 | |||
WormQTL | gene | WBGene00009887 | |||||
WormFlux | gene | WBGene00009887 | |||||
NDB | locus_tag | CELE_F49E2.4 | |||||
NCBI | gene | 186039 | |||||
RefSeq | protein | NM_001270149.4 | |||||
NM_001270150.3 | |||||||
TREEFAM | TREEFAM_ID | TF321698 | |||||
TrEMBL | UniProtAcc | D0VWM4 | |||||
Q20623 | |||||||
UniProt_GCRP | UniProtAcc | D0VWM4 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | glb | ||||||
Allele (57) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00117448 | ||||||
00117449 | |||||||
Ortholog (26) | |||||||
Paralog | WBGene00011296 | Caenorhabditis elegans | From_analysis | TreeFam | |||
WormBase-Compara | |||||||
WBGene00007741 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00008996 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00077763 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Concise_description | glb-17 encodes a globin with no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00025067 | |||
WBPaper00031066 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Dec 2007 00:00:00 | ||||||
Automated_description | Predicted to enable heme binding activity and oxygen binding activity. Expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F49E2.4a | |||||
F49E2.4b | |||||||
Corresponding_transcript | F49E2.4a.1 | ||||||
F49E2.4a.2 | |||||||
F49E2.4b.1 | |||||||
F49E2.4b.2 | |||||||
Other_sequence | NBC05011_1 | ||||||
Acan_isotig12975 | |||||||
Tcir_isotig24085 | |||||||
Tcir_isotig32162 | |||||||
NB10020 | |||||||
Dviv_isotig24816 | |||||||
Tcir_isotig27030 | |||||||
Associated_feature | WBsf1006477 | ||||||
WBsf1023592 | |||||||
WBsf237778 | |||||||
WBsf237779 | |||||||
Experimental_info | RNAi_result | WBRNAi00032546 | Inferred_automatically | RNAi_primary | |||
WBRNAi00047863 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015328 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr8497 | ||||||
Expr1019823 | |||||||
Expr1151694 | |||||||
Expr2012052 | |||||||
Expr2030288 | |||||||
Drives_construct | WBCnstr00013326 | ||||||
WBCnstr00031842 | |||||||
Construct_product | WBCnstr00031842 | ||||||
Microarray_results | SMD_F49E2.4 | ||||||
188112_at | |||||||
A_12_P100769 | |||||||
Aff_F49E2.4 | |||||||
GPL13394_WBGene00009887 | |||||||
GPL13914_F49E2.4 | |||||||
GPL14144_F49E2.4_137-196_0.908_6_B | |||||||
GPL14144_F49E2.4_283-342_0.905_8_C | |||||||
GPL14144_F49E2.4_516-575_0.934_1_A | |||||||
GPL19516_CGZ0022775 | |||||||
GPL19516_CGZ0022776 | |||||||
GPL21109_F49E2.4a | |||||||
GPL21109_F49E2.4b | |||||||
GPL3518_CE01012 | |||||||
GPL8304_CE_WBGene00009887_A | |||||||
GPL8673_F49E2_4P00137 | |||||||
GPL8673_F49E2_4P00503 | |||||||
GPL8673_F49E2_4P00518 | |||||||
GPL9450_F49E2.4 | |||||||
cea2.i.54247 | |||||||
Expression_cluster (111) | |||||||
Interaction | WBInteraction000032147 | ||||||
WBInteraction000179968 | |||||||
WBInteraction000200262 | |||||||
WBInteraction000245136 | |||||||
WBInteraction000327744 | |||||||
Map_info | Map | X | Position | 1.42181 | |||
Positive | Positive_clone | F49E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031066 | ||||||
WBPaper00032254 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |