WormBase Tree Display for Gene: WBGene00009887
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| WBGene00009887 | SMap | S_parent | Sequence | F49E2 | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | glb | |||||
| Allele (57) | ||||||
| RNASeq_FPKM (74) | ||||||
| GO_annotation (2) | ||||||
| Ortholog (26) | ||||||
| Paralog | WBGene00011296 | Caenorhabditis elegans | From_analysis | TreeFam | ||
| WormBase-Compara | ||||||
| WBGene00007741 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
| WBGene00008996 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
| WBGene00077763 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
| Structured_description | Concise_description | glb-17 encodes a globin with no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00025067 | ||
| WBPaper00031066 | ||||||
| Curator_confirmed | WBPerson567 | |||||
| Date_last_updated | 17 Dec 2007 00:00:00 | |||||
| Automated_description | Predicted to enable heme binding activity and oxygen binding activity. Expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord. | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | F49E2.4a | ||||
| F49E2.4b | ||||||
| Corresponding_transcript | F49E2.4a.1 | |||||
| F49E2.4a.2 | ||||||
| F49E2.4b.1 | ||||||
| F49E2.4b.2 | ||||||
| Other_sequence | NBC05011_1 | |||||
| Acan_isotig12975 | ||||||
| Tcir_isotig24085 | ||||||
| Tcir_isotig32162 | ||||||
| NB10020 | ||||||
| Dviv_isotig24816 | ||||||
| Tcir_isotig27030 | ||||||
| Associated_feature | WBsf1006477 | |||||
| WBsf1023592 | ||||||
| WBsf237778 | ||||||
| WBsf237779 | ||||||
| Experimental_info | RNAi_result | WBRNAi00032546 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00047863 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00015328 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr8497 | |||||
| Expr1019823 | ||||||
| Expr1151694 | ||||||
| Expr2012052 | ||||||
| Expr2030288 | ||||||
| Drives_construct | WBCnstr00013326 | |||||
| WBCnstr00031842 | ||||||
| Construct_product | WBCnstr00031842 | |||||
| Microarray_results (20) | ||||||
| Expression_cluster (111) | ||||||
| Interaction | WBInteraction000032147 | |||||
| WBInteraction000179968 | ||||||
| WBInteraction000200262 | ||||||
| WBInteraction000245136 | ||||||
| WBInteraction000327744 | ||||||
| Map_info | Map | X | Position | 1.42181 | ||
| Positive | Positive_clone | F49E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00031066 | |||||
| WBPaper00032254 | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
