WormBase Tree Display for Gene: WBGene00009887

WBGene00009887 SMap: S_parent: Sequence: F49E2
  Identity: Version: 2
    Name: CGC_name: glb-17 Paper_evidence: WBPaper00031066
          Person_evidence: WBPerson1540
      Sequence_name: F49E2.4
      Molecular_name: F49E2.4a
        F49E2.4a.1
        CE01012
        F49E2.4b
        CE44201
        F49E2.4a.2
        F49E2.4b.1
        F49E2.4b.2
      Other_name: CELE_F49E2.4 Accession_evidence: NDB BX284606
      Public_name: glb-17
    DB_info: Database: AceView gene XK192
        WormQTL gene WBGene00009887
        WormFlux gene WBGene00009887
        NDB locus_tag CELE_F49E2.4
        NCBI gene 186039
        RefSeq protein NM_001270149.4
            NM_001270150.3
        TREEFAM TREEFAM_ID TF321698
        TrEMBL UniProtAcc D0VWM4
            Q20623
        UniProt_GCRP UniProtAcc D0VWM4
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 22 Oct 2007 15:16:42 WBPerson2970 Name_change: CGC_name: glb-17
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: glb
    Allele (57)
    RNASeq_FPKM (74)
    GO_annotation: 00117448
      00117449
    Ortholog: WBGene00036145 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00059766 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00156007 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00095472 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00123919 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g3977 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12503 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1442 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21559 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g9436 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g15349 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g7103 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5456 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g10606 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4748 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00044.g2379 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-glb-17 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13468 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00008.g593 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_02216 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023324 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07527 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g8673 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_X0056600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19763 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00263725 Strongyloides ratti From_analysis: WormBase-Compara
    Paralog: WBGene00011296 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00007741 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00008996 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00077763 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: glb-17 encodes a globin with no obvious function in mass RNAi assays. Paper_evidence: WBPaper00025067
            WBPaper00031066
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Dec 2007 00:00:00
      Automated_description: Predicted to enable heme binding activity and oxygen binding activity. Expressed in head neurons; lateral nerve cord; tail neurons; ventral cord neurons; and ventral nerve cord. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F49E2.4a
      F49E2.4b
    Corresponding_transcript: F49E2.4a.1
      F49E2.4a.2
      F49E2.4b.1
      F49E2.4b.2
    Other_sequence: NBC05011_1
      Acan_isotig12975
      Tcir_isotig24085
      Tcir_isotig32162
      NB10020
      Dviv_isotig24816
      Tcir_isotig27030
    Associated_feature: WBsf1006477
      WBsf1023592
      WBsf237778
      WBsf237779
  Experimental_info: RNAi_result: WBRNAi00032546 Inferred_automatically: RNAi_primary
      WBRNAi00047863 Inferred_automatically: RNAi_primary
      WBRNAi00015328 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr8497
      Expr1019823
      Expr1151694
      Expr2012052
      Expr2030288
    Drives_construct: WBCnstr00013326
      WBCnstr00031842
    Construct_product: WBCnstr00031842
    Microarray_results (20)
    Expression_cluster (111)
    Interaction: WBInteraction000032147
      WBInteraction000179968
      WBInteraction000200262
      WBInteraction000245136
      WBInteraction000327744
  Map_info: Map: X Position: 1.42181
    Positive: Positive_clone: F49E2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031066
    WBPaper00032254
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene