WormBase Tree Display for Gene: WBGene00009822
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| WBGene00009822 | SMap | S_parent | Sequence | F47G4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-113 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | F47G4.1 | ||||||||
| Molecular_name | F47G4.1 | ||||||||
| F47G4.1.1 | |||||||||
| CE18700 | |||||||||
| Other_name | CELE_F47G4.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | clec-113 | ||||||||
| DB_info | Database | AceView | gene | 1O646 | |||||
| WormQTL | gene | WBGene00009822 | |||||||
| WormFlux | gene | WBGene00009822 | |||||||
| NDB | locus_tag | CELE_F47G4.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009822|UniProtKB=Q9XTS6 | |||||||
| family | PTHR47629 | ||||||||
| NCBI | gene | 185945 | |||||||
| RefSeq | protein | NM_061049.3 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | Q9XTS6 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XTS6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-113 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (44) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (128) | |||||||||
| Structured_description | Automated_description | Enriched in NSM and neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including pgl-1; csr-1; and mex-3 based on tiling array and RNA-seq studies. Is affected by four chemicals including Psoralens; Sirolimus; and Ethanol based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: PAN-like domain; PAN-3 domain; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F47G4.1 | |||||||
| Corresponding_transcript | F47G4.1.1 | ||||||||
| Other_sequence | HC08840 | ||||||||
| FC810196.1 | |||||||||
| PT03348 | |||||||||
| MC03392 | |||||||||
| Associated_feature | WBsf220566 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00032448 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047679 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003697 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023454 | ||||||||
| Expr1151520 | |||||||||
| Expr2010057 | |||||||||
| Expr2028298 | |||||||||
| Drives_construct | WBCnstr00031892 | ||||||||
| Construct_product | WBCnstr00031892 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (33) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Map | I | Position | 22.9631 | Error | 0.010535 | |||
| Positive | Positive_clone | F47G4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
