WormBase Tree Display for Gene: WBGene00009793
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WBGene00009793 | SMap | S_parent | Sequence | CHROMOSOME_X | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | pkn-1 | Person_evidence | WBPerson56 | |||
WBPerson505 | |||||||
Sequence_name | F46F6.2 | ||||||
Molecular_name (12) | |||||||
Other_name | CELE_F46F6.2 | Accession_evidence | NDB | BX284606 | |||
Public_name | pkn-1 | ||||||
DB_info | Database (13) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pkn | ||||||
Allele (71) | |||||||
Strain | WBStrain00002832 | ||||||
WBStrain00036580 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (22) | |||||||
Ortholog (43) | |||||||
Paralog (14) | |||||||
Structured_description | Automated_description | Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction. Located in M band and striated muscle dense body. Expressed in neurons and pharyngeal muscle cell. Is an ortholog of human PKN3 (protein kinase N3). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F46F6.2a | |||||
F46F6.2b | |||||||
F46F6.2c | |||||||
F46F6.2d | |||||||
Corresponding_CDS_history | F46F6.2:wp83 | ||||||
F46F6.2b:wp271 | |||||||
Corresponding_transcript | F46F6.2a.1 | ||||||
F46F6.2b.1 | |||||||
F46F6.2c.1 | |||||||
F46F6.2d.1 | |||||||
Other_sequence (35) | |||||||
Associated_feature (14) | |||||||
Experimental_info | RNAi_result | WBRNAi00047564 | Inferred_automatically | RNAi_primary | |||
WBRNAi00109716 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001225 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00032385 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015119 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00021734 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00109763 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00076440 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00109669 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00109810 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1838 | ||||||
Expr6091 | |||||||
Expr9387 | |||||||
Expr11211 | |||||||
Expr11212 | |||||||
Expr1015556 | |||||||
Expr1034280 | |||||||
Expr1151402 | |||||||
Expr2014949 | |||||||
Expr2033184 | |||||||
Drives_construct | WBCnstr00003354 | ||||||
WBCnstr00018222 | |||||||
WBCnstr00031916 | |||||||
Construct_product | WBCnstr00013952 | ||||||
WBCnstr00018223 | |||||||
WBCnstr00031916 | |||||||
Microarray_results (22) | |||||||
Expression_cluster (143) | |||||||
Interaction (59) | |||||||
Map_info | Map | X | Position | 2.17965 | Error | 0.004397 | |
Positive | Positive_clone | F46F6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00027258 | ||||||
WBPaper00038084 | |||||||
WBPaper00038444 | |||||||
WBPaper00038491 | |||||||
WBPaper00038843 | |||||||
WBPaper00040494 | |||||||
WBPaper00055090 | |||||||
WBPaper00057543 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |