WormBase Tree Display for Gene: WBGene00009744

WBGene00009744 SMap: S_parent: Sequence: F45H11
  Identity: Version: 2
    Name: CGC_name: hpo-35 Paper_evidence: WBPaper00038231
          Person_evidence: WBPerson26
      Sequence_name: F45H11.3
      Molecular_name: F45H11.3
        F45H11.3.1
        CE33785
      Other_name: CELE_F45H11.3 Accession_evidence: NDB BX284601
      Public_name: hpo-35
    DB_info: Database: AceView gene 1K955
        WormQTL gene WBGene00009744
        WormFlux gene WBGene00009744
        NDB locus_tag CELE_F45H11.3
        Panther gene CAEEL|WormBase=WBGene00009744|UniProtKB=Q93726
          family PTHR36942
        NCBI gene 172911
        RefSeq protein NM_001264435.3
        TREEFAM TREEFAM_ID TF322390
        TrEMBL UniProtAcc Q93726
        UniProt_GCRP UniProtAcc Q93726
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Apr 2011 13:31:47 WBPerson2970 Name_change: CGC_name: hpo-35
      Split_into: WBGene00189958
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpo
    Allele (69)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP1600
    Ortholog (20)
    Paralog: WBGene00010690 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00010689 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00010691 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Concise_description: F45H11.3 encodes an unfamiliar 738-aa protein that inhibits DHC-1 invivo; F45H11.3 has no obvious non-Caenorhabditis homologs, but itsC-terminal ~150 residues are similar to K08H2.4 and K08H2.3; F45H11.3 isrequired for embryonic development in mass RNAi assays. Paper_evidence: WBPaper00006395
            WBPaper00030897
          Curator_confirmed: WBPerson567
          Date_last_updated: 26 Aug 2007 00:00:00
      Automated_description: Enriched in AVK and germ line based on RNA-seq studies. Is affected by several genes including daf-2; let-7; and gld-1 based on RNA-seq; proteomic; and microarray studies. Is affected by seven chemicals including Alovudine; stavudine; and Zidovudine based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F45H11.3
    Corresponding_CDS_history: F45H11.3:wp47
      F45H11.3b:wp202
    Corresponding_transcript: F45H11.3.1
    Other_sequence: XI00400
      CRC05748_1
      CRC00322_1
      XIC03263_1
      CR00874
    Associated_feature: WBsf643674
      WBsf218421
  Experimental_info: RNAi_result: WBRNAi00000760 Inferred_automatically: RNAi_primary
      WBRNAi00025523 Inferred_automatically: RNAi_primary
      WBRNAi00003673 Inferred_automatically: RNAi_primary
      WBRNAi00025522 Inferred_automatically: RNAi_primary
      WBRNAi00088671 Inferred_automatically: RNAi_primary
      WBRNAi00025524 Inferred_automatically: RNAi_primary
      WBRNAi00088778 Inferred_automatically: RNAi_primary
      WBRNAi00047452 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024588
      Expr1034268
      Expr1151291
      Expr2012575
      Expr2030811
    Microarray_results (23)
    Expression_cluster (88)
    Interaction (24)
  Map_info: Map: I Position: 4.95746 Error: 0.002693
    Positive: Positive_clone: F45H11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00035010
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene