WormBase Tree Display for Gene: WBGene00009720
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| WBGene00009720 | SMap | S_parent | Sequence | F45B8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | idpp-3 | Person_evidence | WBPerson1820 | |||||
| Sequence_name | F45B8.3 | ||||||||
| Molecular_name | F45B8.3 | ||||||||
| F45B8.3.1 | |||||||||
| CE23731 | |||||||||
| Other_name | CELE_F45B8.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | idpp-3 | ||||||||
| DB_info | Database | AceView | gene | XP580 | |||||
| WormQTL | gene | WBGene00009720 | |||||||
| WormFlux | gene | WBGene00009720 | |||||||
| NDB | locus_tag | CELE_F45B8.3 | |||||||
| NCBI | gene | 181589 | |||||||
| RefSeq | protein | NM_078080.5 | |||||||
| TrEMBL | UniProtAcc | O45522 | |||||||
| UniProt_GCRP | UniProtAcc | O45522 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | idpp-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | idpp | ||||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00034707 | ||||||||
| 00034708 | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in excretory system and lateral ganglion based on single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on tiling array; microarray; and RNA-seq studies. Is affected by nine chemicals including 1-methylnicotinamide; Rifampin; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F45B8.3 | |||||||
| Corresponding_transcript | F45B8.3.1 | ||||||||
| Associated_feature | WBsf654620 | ||||||||
| WBsf1008049 | |||||||||
| WBsf1024490 | |||||||||
| WBsf238271 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014975 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032273 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047347 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027496 | ||||||||
| Expr1034249 | |||||||||
| Expr1151200 | |||||||||
| Expr2003740 | |||||||||
| Expr2021960 | |||||||||
| Drives_construct | WBCnstr00031968 | ||||||||
| Construct_product | WBCnstr00031968 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (116) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | X | Position | 21.5978 | |||||
| Positive | Positive_clone | F45B8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00034471 | ||||||||
| WBPaper00064648 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
