WormBase Tree Display for Gene: WBGene00009709
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| WBGene00009709 | SMap | S_parent | Sequence | F44G3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 5 | |||||||
| Name | CGC_name | fbxa-144 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F44G3.8 | ||||||||
| Molecular_name | F44G3.8b | ||||||||
| F44G3.8b.1 | |||||||||
| CE44755 | |||||||||
| F44G3.8c | |||||||||
| Other_name | CELE_F44G3.8 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | fbxa-144 | ||||||||
| DB_info | Database | AceView | gene | 5Q606 | |||||
| WormQTL | gene | WBGene00009709 | |||||||
| WormFlux | gene | WBGene00009709 | |||||||
| NDB | locus_tag | CELE_F44G3.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009709|UniProtKB=D5MCV2 | |||||||
| family | PTHR23015 | ||||||||
| NCBI | gene | 185756 | |||||||
| RefSeq | protein | NM_001269769.2 | |||||||
| NR_070066.1 | |||||||||
| TrEMBL | UniProtAcc | D5MCV2 | |||||||
| UniProt_GCRP | UniProtAcc | D5MCV2 | |||||||
| RNAcentral | URSid | URS000013CC16 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 Nov 2005 18:17:17 | WBPerson1983 | Event | Split_into | WBGene00044659 | ||||
| 3 | 07 Nov 2005 18:17:32 | WBPerson1983 | Event | Split_into | WBGene00044660 | ||||
| 4 | 07 Nov 2005 18:17:45 | WBPerson1983 | Event | Split_into | WBGene00044661 | ||||
| 5 | 01 Mar 2007 11:55:18 | WBPerson2970 | Name_change | CGC_name | fbxa-144 | ||||
| Split_into | WBGene00044659 | ||||||||
| WBGene00044660 | |||||||||
| WBGene00044661 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxa | ||||||||
| Allele | WBVar01485173 | ||||||||
| WBVar00030925 | |||||||||
| WBVar00030930 | |||||||||
| WBVar00030935 | |||||||||
| WBVar00030940 | |||||||||
| WBVar00030945 | |||||||||
| WBVar01976164 | |||||||||
| WBVar01800750 | |||||||||
| WBVar01800751 | |||||||||
| WBVar01976165 | |||||||||
| WBVar01976166 | |||||||||
| WBVar01800752 | |||||||||
| WBVar00030950 | |||||||||
| WBVar00480579 | |||||||||
| WBVar00480580 | |||||||||
| WBVar00030955 | |||||||||
| WBVar00480581 | |||||||||
| WBVar00480582 | |||||||||
| WBVar00480583 | |||||||||
| WBVar00030960 | |||||||||
| WBVar00480584 | |||||||||
| WBVar00480585 | |||||||||
| WBVar00030965 | |||||||||
| WBVar01078289 | |||||||||
| WBVar01078290 | |||||||||
| WBVar00030970 | |||||||||
| WBVar01078291 | |||||||||
| WBVar01078292 | |||||||||
| WBVar01078293 | |||||||||
| WBVar00030975 | |||||||||
| WBVar01078294 | |||||||||
| WBVar01078295 | |||||||||
| WBVar00030980 | |||||||||
| WBVar01078296 | |||||||||
| WBVar01078297 | |||||||||
| WBVar01078298 | |||||||||
| WBVar01078299 | |||||||||
| WBVar00030985 | |||||||||
| WBVar01078300 | |||||||||
| WBVar01078301 | |||||||||
| WBVar00030990 | |||||||||
| WBVar01078302 | |||||||||
| WBVar01592283 | |||||||||
| WBVar01078303 | |||||||||
| WBVar01078304 | |||||||||
| WBVar01592284 | |||||||||
| WBVar01592285 | |||||||||
| WBVar00030995 | |||||||||
| WBVar01078305 | |||||||||
| WBVar01592286 | |||||||||
| WBVar01078306 | |||||||||
| WBVar02122682 | |||||||||
| WBVar01078307 | |||||||||
| WBVar01592287 | |||||||||
| WBVar00091127 | |||||||||
| WBVar00031000 | |||||||||
| WBVar01592288 | |||||||||
| WBVar01592289 | |||||||||
| WBVar01592290 | |||||||||
| WBVar00031005 | |||||||||
| WBVar01592291 | |||||||||
| WBVar01592292 | |||||||||
| WBVar01592293 | |||||||||
| WBVar00031010 | |||||||||
| WBVar01592294 | |||||||||
| WBVar01592295 | |||||||||
| WBVar01592296 | |||||||||
| WBVar00031015 | |||||||||
| WBVar01592297 | |||||||||
| WBVar01592298 | |||||||||
| WBVar00031020 | |||||||||
| WBVar00031025 | |||||||||
| WBVar01632954 | |||||||||
| WBVar01632955 | |||||||||
| WBVar01632956 | |||||||||
| WBVar01398447 | |||||||||
| WBVar01632957 | |||||||||
| WBVar02038967 | |||||||||
| WBVar01632958 | |||||||||
| WBVar01632959 | |||||||||
| WBVar01632960 | |||||||||
| WBVar01632961 | |||||||||
| WBVar01632962 | |||||||||
| WBVar01632963 | |||||||||
| WBVar01632964 | |||||||||
| WBVar01991122 | |||||||||
| WBVar01632965 | |||||||||
| WBVar01991123 | |||||||||
| WBVar01632966 | |||||||||
| WBVar01632967 | |||||||||
| WBVar01498519 | |||||||||
| WBVar02094578 | |||||||||
| WBVar00603051 | |||||||||
| WBVar02091092 | |||||||||
| WBVar02091093 | |||||||||
| WBVar01745920 | |||||||||
| WBVar01745921 | |||||||||
| WBVar01745922 | |||||||||
| WBVar02024981 | |||||||||
| WBVar01498548 | |||||||||
| WBVar01500212 | |||||||||
| WBVar01500213 | |||||||||
| WBVar02124056 | |||||||||
| WBVar01499299 | |||||||||
| WBVar00592928 | |||||||||
| WBVar00592933 | |||||||||
| WBVar00592936 | |||||||||
| WBVar02124626 | |||||||||
| WBVar02124261 | |||||||||
| WBVar00091247 | |||||||||
| WBVar01828940 | |||||||||
| WBVar02124830 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00071797 | Caenorhabditis remanei | From_analysis | TreeFam | |||||
| WBGene00071800 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00080375 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WBGene00084134 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WBGene00085145 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WBGene00078863 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| chrIV_pilon.g9950 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (217) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in ALM; AVA; and PLM based on tiling array and microarray studies. Is affected by several genes including daf-16; hsf-1; and eat-2 based on microarray and RNA-seq studies. Is affected by nine chemicals including methylmercuric chloride; Zidovudine; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species; FTH domain; and F-box A protein FB224. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F44G3.8b | |||||||
| Corresponding_CDS_history | F44G3.8:wp150 | ||||||||
| F44G3.8:wp195 | |||||||||
| F44G3.8a:wp261 | |||||||||
| Corresponding_transcript | F44G3.8c | ||||||||
| F44G3.8b.1 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00047335 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1024073 | ||||||||
| Expr1151188 | |||||||||
| Expr2011479 | |||||||||
| Drives_construct | WBCnstr00031977 | ||||||||
| Construct_product | WBCnstr00031977 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (82) | |||||||||
| Map_info | Map | V | Position | 9.79035 | Error | 0.003271 | |||
| Positive | Positive_clone | F44G3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012854 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
