WormBase Tree Display for Gene: WBGene00009666

WBGene00009666 SMap: S_parent: Sequence: F43G9
  Identity: Version: 2
    Name: CGC_name: slc-25A42 Person_evidence: WBPerson555
      Sequence_name: F43G9.3
      Molecular_name: F43G9.3
        F43G9.3.1
        CE10358
        F43G9.3.2
      Other_name: CELE_F43G9.3 Accession_evidence: NDB BX284601
      Public_name: slc-25A42
    DB_info: Database: AceView gene 1J190
        WormQTL gene WBGene00009666
        WormFlux gene WBGene00009666
        NDB locus_tag CELE_F43G9.3
        Panther gene CAEEL|WormBase=WBGene00009666|UniProtKB=Q93717
          family PTHR24089
        NCBI gene 172656
        RefSeq protein NM_059932.5
        TREEFAM TREEFAM_ID TF314806
        TrEMBL UniProtAcc Q93717
        UniProt_GCRP UniProtAcc Q93717
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 27 Apr 2016 14:42:59 WBPerson2970 Name_change: CGC_name: slc-25A42
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: slc
    Allele (28)
    Strain: WBStrain00002106
    RNASeq_FPKM (74)
    GO_annotation: 00086498
      00086499
      00086500
      00117300
    Contained_in_operon: CEOP1488
    Ortholog: WBGene00060097 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00033444 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00142087 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00129593 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00224327 Brugia malayi From_analysis: WormBase-Compara
      WBGene00229655 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g9668 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5050 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g12423 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g1731 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g2274 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8271 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g7693 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g11019 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20267 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g24329 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00072.g3425 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-slc-25A42 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20458 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02937.g28458 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_02937.g28463 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07064 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002627 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g14128 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g20646 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10313800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1628 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00238165 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00248453 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00278340 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00263070 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00263288 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291919 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000001044 Saccharomyces cerevisiae From_analysis: OMA
            Panther
      FB:FBgn0067783 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-060825-313 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:28380 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1920345 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1592346 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (35)
    Structured_description: Automated_description: Predicted to be involved in transmembrane transport. Predicted to be located in membrane. Expressed in head. Is an ortholog of human SLC25A42 (solute carrier family 25 member 42). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F43G9.3
    Corresponding_transcript: F43G9.3.1
      F43G9.3.2
    Other_sequence (36)
    Associated_feature: WBsf649401
      WBsf664586
      WBsf219952
  Experimental_info: RNAi_result (20)
    Expr_pattern: Expr6064
      Expr1010384
      Expr1034224
      Expr1151082
      Expr2015871
      Expr2034104
    Drives_construct: WBCnstr00002810
      WBCnstr00032011
    Construct_product: WBCnstr00016478
      WBCnstr00032011
    Microarray_results (20)
    Expression_cluster (92)
    Interaction (36)
  Map_info: Positive: Positive_clone: F43G9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 2.99609
  Reference: WBPaper00028984
    WBPaper00038491
    WBPaper00041771
    WBPaper00055090
  Method: Gene