WormBase Tree Display for Gene: WBGene00009638
expand all nodes | collapse all nodes | view schema
| WBGene00009638 | SMap | S_parent | Sequence | F42F12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nspc-14 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F42F12.7 | ||||||||
| Molecular_name | F42F12.7 | ||||||||
| F42F12.7.1 | |||||||||
| CE31939 | |||||||||
| Other_name | CELE_F42F12.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | nspc-14 | ||||||||
| DB_info | Database | AceView | gene | XM976 | |||||
| WormQTL | gene | WBGene00009638 | |||||||
| WormFlux | gene | WBGene00009638 | |||||||
| NDB | locus_tag | CELE_F42F12.7 | |||||||
| NCBI | gene | 181395 | |||||||
| RefSeq | protein | NM_182449.8 | |||||||
| TREEFAM | TREEFAM_ID | TF318876 | |||||||
| TrEMBL | UniProtAcc | G5EF55 | |||||||
| UniProt_GCRP | UniProtAcc | G5EF55 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 May 2005 14:07:22 | WBPerson2970 | Name_change | CGC_name | nspc-14 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nspc | ||||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (259) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Enriched in ASER and excretory gland cell based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by fifteen chemicals including rotenone; mianserin; and D-glucose based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F42F12.7 | |||||||
| Corresponding_CDS_history | F42F12.7:wp87 | ||||||||
| Corresponding_transcript | F42F12.7.1 | ||||||||
| Other_sequence | CR12238 | ||||||||
| CBC00222_4 | |||||||||
| CRC07389_1 | |||||||||
| Associated_feature | WBsf238058 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00047106 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1150973 | ||||||||
| Expr2014465 | |||||||||
| Expr2032705 | |||||||||
| Drives_construct | WBCnstr00032034 | ||||||||
| Construct_product | WBCnstr00032034 | ||||||||
| Microarray_results | SMD_F42F12.7 | ||||||||
| A_12_P107617 | |||||||||
| GPL8304_CE_WBGene00009638_A | |||||||||
| GPL8673_F42F12_7P00063 | |||||||||
| GPL8673_F42F12_7P00094 | |||||||||
| GPL9450_F42F12.7 | |||||||||
| cea2.d.25296 | |||||||||
| Expression_cluster (163) | |||||||||
| Interaction (55) | |||||||||
| Map_info | Map | X | Position | 7.03287 | |||||
| Positive | Positive_clone | F42F12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064841 | ||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
