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WormBase Tree Display for Gene: WBGene00009634

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Name Class

WBGene00009634SMapS_parentSequenceF42F12
IdentityVersion2
NameCGC_namenspc-9Person_evidenceWBPerson655
Sequence_nameF42F12.1
Molecular_nameF42F12.1
F42F12.1.1
CE31938
Other_nameCELE_F42F12.1Accession_evidenceNDBBX284606
Public_namenspc-9
DB_infoDatabaseAceViewgeneXM962
WormQTLgeneWBGene00009634
WormFluxgeneWBGene00009634
NDBlocus_tagCELE_F42F12.1
PanthergeneCAEEL|WormBase=WBGene00009634|UniProtKB=Q20345
familyPTHR31330
NCBIgene181391
RefSeqproteinNM_077669.5
TREEFAMTREEFAM_IDTF318876
TrEMBLUniProtAccQ20345
UniProt_GCRPUniProtAccQ20345
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
219 May 2005 09:03:42WBPerson2970Name_changeCGC_namenspc-9
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classnspc
Allele (14)
RNASeq_FPKM (74)
Ortholog (259)
Paralog (18)
Structured_descriptionAutomated_descriptionEnriched in excretory gland cell and intestine based on single-cell RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including rotenone; mianserin; and D-glucose based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF42F12.1
Corresponding_CDS_historyF42F12.1:wp87
Corresponding_transcriptF42F12.1.1
Associated_featureWBsf1007277
WBsf1024033
WBsf238055
Experimental_infoRNAi_resultWBRNAi00047106Inferred_automaticallyRNAi_primary
WBRNAi00047102Inferred_automaticallyRNAi_primary
Expr_patternExpr1150965
Expr2014476
Drives_constructWBCnstr00032038
Construct_productWBCnstr00032038
Microarray_results (12)
Expression_cluster (152)
InteractionWBInteraction000301947
WBInteraction000355380
WBInteraction000359707
WBInteraction000412862
WBInteraction000452693
WBInteraction000459445
Map_infoMapXPosition7.03152
PositivePositive_cloneF42F12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00064841
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene