WormBase Tree Display for Gene: WBGene00009621
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| WBGene00009621 | SMap | S_parent | Sequence | F41E7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fipr-21 | Person_evidence | WBPerson168 | |||||
| Sequence_name | F41E7.5 | ||||||||
| Molecular_name | F41E7.5 | ||||||||
| F41E7.5.1 | |||||||||
| CE03305 | |||||||||
| Other_name | CELE_F41E7.5 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | fipr-21 | ||||||||
| DB_info | Database | AceView | gene | XK923 | |||||
| WormQTL | gene | WBGene00009621 | |||||||
| WormFlux | gene | WBGene00009621 | |||||||
| NDB | locus_tag | CELE_F41E7.5 | |||||||
| NCBI | gene | 181238 | |||||||
| RefSeq | protein | NM_077326.6 | |||||||
| TrEMBL | UniProtAcc | Q20277 | |||||||
| UniProt_GCRP | UniProtAcc | Q20277 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 03 Apr 2007 10:48:52 | WBPerson2970 | Name_change | CGC_name | fipr-21 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fipr | ||||||||
| Allele (11) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00058491 | Caenorhabditis remanei | From_analysis | OMA | |||||
| WBGene00131739 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| WBGene00036910 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
| WBGene00158025 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
| chrX_pilon.g19881 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in germline precursor cell; hypodermis; intestine; seam cell; and sensory neurons based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-one chemicals including nicotinic acid; rotenone; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F41E7.5 | |||||||
| Corresponding_transcript | F41E7.5.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf648461 | ||||||||
| WBsf236267 | |||||||||
| WBsf236268 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014756 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032100 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047004 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010492 | ||||||||
| Expr1150868 | |||||||||
| Expr2011778 | |||||||||
| Expr2030015 | |||||||||
| Drives_construct | WBCnstr00032048 | ||||||||
| Construct_product | WBCnstr00032048 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (265) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | X | Position | 1.94897 | |||||
| Positive | Positive_clone | F41E7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064898 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
