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WormBase Tree Display for Gene: WBGene00009397

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Name Class

WBGene00009397SMapS_parentSequenceF35C5
IdentityVersion2
NameCGC_nameclec-66Person_evidenceWBPerson261
WBPerson655
Sequence_nameF35C5.9
Molecular_nameF35C5.9
F35C5.9.1
CE15950
Other_nameCELE_F35C5.9Accession_evidenceNDBBX284602
Public_nameclec-66
DB_infoDatabaseAceViewgene2N195
WormQTLgeneWBGene00009397
WormFluxgeneWBGene00009397
NDBlocus_tagCELE_F35C5.9
PanthergeneCAEEL|WormBase=WBGene00009397|UniProtKB=O45445
familyPTHR31024
NCBIgene174929
RefSeqproteinNM_064345.6
TREEFAMTREEFAM_IDTF317104
TrEMBLUniProtAccO45445
UniProt_GCRPUniProtAccO45445
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
228 Sep 2005 17:40:12WBPerson2970Name_changeCGC_nameclec-66
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (59)
StrainWBStrain00032436
RNASeq_FPKM (74)
GO_annotation00034519
OrthologWBGene00069846Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00026984Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00158750Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00151042Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WBGene00109123Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00151373Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00130713Caenorhabditis japonicaFrom_analysisInparanoid_8
WBGene00097188Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00098882Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00093171Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111723Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00092267Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00110964Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00108103Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00103848Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111777Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00108491Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111481Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111718Pristionchus pacificusFrom_analysisInparanoid_8
CSP26.g384Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8054Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20038Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g2818Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g2820Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g20102Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g7679Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3172Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-clec-66Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold492.g2141Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold492.g2142Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01499.g21301Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08663Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_003834Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01378Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04676Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08072Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12105Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12107Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g11472Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g18412Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g18481Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2155Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23296Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20168910Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g6280Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00128079Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00095459Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096168Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115326Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00283764Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00259015Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00263770Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267716Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (13)
Structured_descriptionAutomated_descriptionInvolved in innate immune response. Expressed in intestine.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF35C5.9
Corresponding_transcriptF35C5.9.1
Other_sequenceCJC03534_1
Associated_featureWBsf644776
WBsf222306
WBsf222307
Experimental_infoRNAi_resultWBRNAi00046307Inferred_automaticallyRNAi_primary
WBRNAi00103326Inferred_automaticallyRNAi_primary
WBRNAi00014307Inferred_automaticallyRNAi_primary
WBRNAi00031763Inferred_automaticallyRNAi_primary
WBRNAi00075939Inferred_automaticallyRNAi_primary
WBRNAi00002057Inferred_automaticallyRNAi_primary
Expr_patternExpr1002
Expr1012366
Expr1034114
Expr1150195
Expr2010199
Expr2028440
Drives_constructWBCnstr00032220
Construct_productWBCnstr00032220
Microarray_results (20)
Expression_cluster (320)
InteractionWBInteraction000378063
WBInteraction000503155
WBInteraction000550304
WBInteraction000580644
Map_info (3)
ReferenceWBPaper00031686
WBPaper00061178
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene