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WormBase Tree Display for Gene: WBGene00009394

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Name Class

WBGene00009394SMapS_parentSequenceF35C5
IdentityVersion2
NameCGC_nameclec-63Person_evidenceWBPerson261
WBPerson655
Sequence_nameF35C5.6
Molecular_nameF35C5.6
F35C5.6.1
CE15947
Other_nameCELE_F35C5.6Accession_evidenceNDBBX284602
Public_nameclec-63
DB_infoDatabaseAceViewgene2N187
WormQTLgeneWBGene00009394
WormFluxgeneWBGene00009394
NDBlocus_tagCELE_F35C5.6
PanthergeneCAEEL|WormBase=WBGene00009394|UniProtKB=O45444
familyPTHR31024
NCBIgene174927
RefSeqproteinNM_064342.7
TREEFAMTREEFAM_IDTF317104
TrEMBLUniProtAccO45444
UniProt_GCRPUniProtAccO45444
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:50WBPerson1971EventImportedInitial conversion from CDS class of WS125
228 Sep 2005 17:40:12WBPerson2970Name_changeCGC_nameclec-63
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classclec
Allele (69)
StrainWBStrain00032688
RNASeq_FPKM (74)
OrthologWBGene00026985Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00069848Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00160560Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00097188Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00134247Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00109123Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00098882Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00093171Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111723Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00092267Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00110964Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00108103Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00103848Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111777Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00108491Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111481Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00111718Pristionchus pacificusFrom_analysisInparanoid_8
CBOVI.g7663Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g7664Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g7666Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g7667Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g4686Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g382Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8051Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20042Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g14927Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4968Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g7058Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3167Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00027.g1645Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_II.g5080Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold492.g2144Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01499.g21298Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08661Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_003831Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g01378Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g04676Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08072Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12105Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12107Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g11472Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g18412Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g18481Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2155Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23296Panagrellus redivivusFrom_analysisWormBase-Compara
chrII_pilon.g6278Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00095459Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00096168Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115326Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00283764Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00259015Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00263770Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00267716Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (13)
Structured_descriptionAutomated_descriptionExpressed in germ line and intestine. Is predicted to encode a protein with the following domains: von Willebrand factor, type A; C-type lectin fold; von Willebrand factor type A domain; von Willebrand factor A-like domain superfamily; C-type lectin-like/link domain superfamily; and C-type lectin-like.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF35C5.6
Corresponding_transcriptF35C5.6.1
Other_sequence (22)
Associated_featureWBsf644774
WBsf222303
WBsf222304
Experimental_infoRNAi_resultWBRNAi00014305Inferred_automaticallyRNAi_primary
WBRNAi00090590Inferred_automaticallyRNAi_primary
WBRNAi00092252Inferred_automaticallyRNAi_primary
WBRNAi00089359Inferred_automaticallyRNAi_primary
WBRNAi00031761Inferred_automaticallyRNAi_primary
WBRNAi00046304Inferred_automaticallyRNAi_primary
WBRNAi00075938Inferred_automaticallyRNAi_primary
WBRNAi00089351Inferred_automaticallyRNAi_primary
Expr_patternExpr1003
Expr1005
Expr1024330
Expr1034113
Expr1150192
Expr2010196
Expr2028438
Drives_constructWBCnstr00032223
Construct_productWBCnstr00032223
Microarray_results (27)
Expression_cluster (280)
Interaction (139)
WBProcessWBbiopr:00000039
Map_infoMapIIPosition12.3104Error0.031034
PositivePositive_cloneF35C5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00030985
WBPaper00031686
WBPaper00037541
WBPaper00041339
WBPaper00058665
WBPaper00059481
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene