WormBase Tree Display for Gene: WBGene00009359
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| WBGene00009359 | SMap | S_parent | Sequence | F33E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | clec-102 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | F33E2.3 | ||||||||
| Molecular_name | F33E2.3 | ||||||||
| F33E2.3.1 | |||||||||
| CE42807 | |||||||||
| Other_name | CELE_F33E2.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | clec-102 | ||||||||
| DB_info | Database | AceView | gene | 1N170 | |||||
| WormQTL | gene | WBGene00009359 | |||||||
| WormFlux | gene | WBGene00009359 | |||||||
| NDB | locus_tag | CELE_F33E2.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009359|UniProtKB=O01701 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 185233 | |||||||
| RefSeq | protein | NM_060787.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322199 | |||||||
| TrEMBL | UniProtAcc | O01701 | |||||||
| UniProt_GCRP | UniProtAcc | O01701 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-102 | ||||
| 3 | 10 Jun 2008 13:49:36 | WBPerson1983 | Event | Split_into | WBGene00077769 | ||||
| Split_into | WBGene00077769 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog (117) | |||||||||
| Structured_description | Automated_description | Enriched in MSpaaaaa and body wall muscle cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-12; pgl-1; and glh-1 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including Tunicamycin; Psoralens; and allantoin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin fold; PAN-3 domain; C-type lectin-like/link domain superfamily; PAN-like domain; and C-type lectin-like. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F33E2.3 | |||||||
| Corresponding_CDS_history | F33E2.3:wp192 | ||||||||
| Corresponding_transcript | F33E2.3.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00046216 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00003577 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014972 | ||||||||
| Expr1150103 | |||||||||
| Expr2010049 | |||||||||
| Expr2028290 | |||||||||
| Drives_construct | WBCnstr00032256 | ||||||||
| Construct_product | WBCnstr00032256 | ||||||||
| Microarray_results | SMD_F33E2.3 | ||||||||
| GPL14144_F33E2.3_656-715_0.967_1_A | |||||||||
| GPL19516_CGZ0019482 | |||||||||
| GPL21109_F33E2.3 | |||||||||
| GPL8673_F33E2_3P00488 | |||||||||
| Expression_cluster (37) | |||||||||
| Interaction (33) | |||||||||
| Map_info | Map | I | Position | 13.6345 | Error | 0.011476 | |||
| Positive | Positive_clone | F33E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
