WormBase Tree Display for Gene: WBGene00009340
expand all nodes | collapse all nodes | view schema
| WBGene00009340 | SMap | S_parent | Sequence | F32G8 | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Gene_class | best | |||||
| Allele (34) | ||||||
| RNASeq_FPKM (74) | ||||||
| GO_annotation | 00066569 | |||||
| 00066570 | ||||||
| 00066571 | ||||||
| 00066572 | ||||||
| 00066573 | ||||||
| 00117059 | ||||||
| Ortholog (48) | ||||||
| Paralog (26) | ||||||
| Structured_description | Automated_description | Predicted to enable chloride channel activity. Predicted to be involved in chloride transmembrane transport. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in autosomal dominant vitreoretinochoroidopathy and retinal degeneration (multiple). Is an ortholog of several human genes including BEST1 (bestrophin 1); BEST2 (bestrophin 2); and BEST3 (bestrophin 3). | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Disease_info | Potential_model (5) | |||||
| Molecular_info | Corresponding_CDS | F32G8.4 | ||||
| Corresponding_CDS_history | F32G8.4:wp137 | |||||
| Corresponding_transcript | F32G8.4.1 | |||||
| Other_sequence (30) | ||||||
| Associated_feature | WBsf647175 | |||||
| WBsf1001138 | ||||||
| WBsf232393 | ||||||
| Experimental_info | RNAi_result | WBRNAi00046155 | Inferred_automatically | RNAi_primary | ||
| Expr_pattern | Expr1014649 | |||||
| Expr1034085 | ||||||
| Expr1150043 | ||||||
| Expr2009596 | ||||||
| Expr2027833 | ||||||
| Drives_construct | WBCnstr00032271 | |||||
| Construct_product | WBCnstr00032271 | |||||
| Microarray_results (20) | ||||||
| Expression_cluster (192) | ||||||
| Interaction | WBInteraction000293785 | |||||
| WBInteraction000321039 | ||||||
| WBInteraction000443493 | ||||||
| WBInteraction000551616 | ||||||
| WBInteraction000567996 | ||||||
| Map_info | Map | V | Position | 2.59073 | ||
| Positive | Positive_clone | F32G8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
| Pseudo_map_position | ||||||
| Reference | WBPaper00038491 | |||||
| WBPaper00055090 | ||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
| Method | Gene |
