WormBase Tree Display for Gene: WBGene00009323

WBGene00009323 SMap: S_parent: Sequence: F32B6
  Identity: Version: 2
    Name: CGC_name: best-13 Person_evidence: WBPerson260
      Sequence_name: F32B6.9
      Molecular_name: F32B6.9
        F32B6.9.1
        CE09864
      Other_name: CELE_F32B6.9 Accession_evidence: NDB BX284604
      Public_name: best-13
    DB_info: Database: AceView gene 4K667
        WormQTL gene WBGene00009323
        WormFlux gene WBGene00009323
        NDB locus_tag CELE_F32B6.9
        Panther gene CAEEL|WormBase=WBGene00009323|UniProtKB=O45435
          family PTHR10736
        NCBI gene 185198
        RefSeq protein NM_069383.4
        SwissProt UniProtAcc O45435
        UniProt_GCRP UniProtAcc O45435
        OMIM gene 607854
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 07 Feb 2012 16:30:56 WBPerson2970 Name_change: CGC_name: best-13
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: best
    Allele (15)
    Strain: WBStrain00003647
    RNASeq_FPKM (74)
    GO_annotation: 00034505
      00034506
      00034507
      00034508
      00034509
      00034510
      00034511
      00034512
      00034513
      00117043
    Ortholog: WBGene00026323 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00072103 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00151563 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00150204 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00132683 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00147871 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00156276 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00108910 Pristionchus pacificus From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00222991 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g8476 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15727 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g3938 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g19342 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g2141 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g8825 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11791 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g2802 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g6697 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g926 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g13040 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-best-13 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold585.g4840 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00103.g4371 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13739 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014416 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g04347 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12149 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13654 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_40157510 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11448 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00248649 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00112620 Pristionchus pacificus From_analysis: WormBase-Compara
      FB:FBgn0036491 Drosophila melanogaster From_analysis: OMA
            OrthoFinder
            PhylomeDB
      FB:FBgn0036492 Drosophila melanogaster From_analysis: OMA
            OrthoFinder
            PhylomeDB
      ZFIN:ZDB-GENE-070912-6 Danio rerio From_analysis: OMA
            OrthoFinder
            Panther
            PhylomeDB
      HGNC:12703 Homo sapiens From_analysis: OrthoFinder
            Panther
            PhylomeDB
      HGNC:17107 Homo sapiens From_analysis: OrthoFinder
            Panther
            PhylomeDB
      HGNC:17105 Homo sapiens From_analysis: OrthoFinder
            Panther
            PhylomeDB
      HGNC:17106 Homo sapiens From_analysis: OrthoFinder
            Panther
            PhylomeDB
      MGI:1346332 Mus musculus From_analysis: OrthoFinder
            Panther
            PhylomeDB
      MGI:2387588 Mus musculus From_analysis: OrthoFinder
            Panther
            PhylomeDB
      MGI:3580298 Mus musculus From_analysis: OrthoFinder
            Panther
            PhylomeDB
      RGD:1311656 Rattus norvegicus From_analysis: OrthoFinder
            Panther
            PhylomeDB
      RGD:1305439 Rattus norvegicus From_analysis: OrthoFinder
            Panther
            PhylomeDB
      RGD:1305377 Rattus norvegicus From_analysis: OrthoFinder
            Panther
            PhylomeDB
      RGD:1596200 Rattus norvegicus From_analysis: OrthoFinder
            Panther
            PhylomeDB
    Paralog (26)
    Structured_description: Automated_description: Predicted to enable chloride channel activity. Predicted to be involved in chloride transmembrane transport. Predicted to be located in plasma membrane. Predicted to be part of chloride channel complex. Expressed in vulB1; vulB2; vulC; vulD; and vulE. Human ortholog(s) of this gene implicated in autosomal dominant vitreoretinochoroidopathy and retinal degeneration (multiple). Is an ortholog of several human genes including BEST1 (bestrophin 1); BEST2 (bestrophin 2); and BEST3 (bestrophin 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0110396 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12703)
      DOID:4448 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12703)
      DOID:0050661 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12703)
      DOID:0050662 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12703)
      DOID:0111569 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12703)
  Molecular_info: Corresponding_CDS: F32B6.9
    Corresponding_transcript: F32B6.9.1
    Other_sequence (23)
    Associated_feature: WBsf997500
      WBsf997501
      WBsf997502
      WBsf997503
      WBsf997504
      WBsf1018019
      WBsf228901
  Experimental_info: RNAi_result: WBRNAi00031670 Inferred_automatically: RNAi_primary
      WBRNAi00014211 Inferred_automatically: RNAi_primary
      WBRNAi00046120 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr5932
      Expr12306
      Expr1010990
      Expr1034076
      Expr1150003
      Expr2009595
      Expr2027832
    Drives_construct: WBCnstr00004087
      WBCnstr00032286
    Construct_product: WBCnstr00032286
    Microarray_results (22)
    Expression_cluster (126)
    Interaction: WBInteraction000357675
  Map_info: Map: IV Position: 4.4443
    Positive: Positive_clone: F32B6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00033469
    WBPaper00038491
    WBPaper00040183
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene