WormBase Tree Display for Gene: WBGene00009289

WBGene00009289 SMap: S_parent: Sequence: CHROMOSOME_V
  Identity: Version: 2
    Name: CGC_name: exos-7 Person_evidence: WBPerson699
            WBPerson6229
      Sequence_name: F31D4.1
      Molecular_name: F31D4.1
        F31D4.1.1
        CE31921
      Other_name: CELE_F31D4.1 Accession_evidence: NDB BX284605
      Public_name: exos-7
    DB_info: Database: AceView gene 5V311
        WormQTL gene WBGene00009289
        WormFlux gene WBGene00009289
        NDB locus_tag CELE_F31D4.1
        Panther gene CAEEL|WormBase=WBGene00009289|UniProtKB=G5EDS8
          family PTHR11097
        NCBI gene 180369
        RefSeq protein NM_001383513.2
        TREEFAM TREEFAM_ID TF320641
        TrEMBL UniProtAcc G5EDS8
        UniProt_GCRP UniProtAcc G5EDS8
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 04 Jun 2007 15:54:19 WBPerson2970 Name_change: CGC_name: exos-7
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: exos
    Allele (48)
    Strain: WBStrain00051289
    RNASeq_FPKM (74)
    GO_annotation (15)
    Contained_in_operon: CEOP5516
    Ortholog (34)
    Paralog: WBGene00018154 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00018305 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to be involved in RNA metabolic process. Predicted to be part of cytoplasmic exosome (RNase complex) and nuclear exosome (RNase complex). Expressed in motor neurons. Is an ortholog of human EXOSC7 (exosome component 7). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F31D4.1
    Corresponding_CDS_history: F31D4.1:wp87
    Corresponding_transcript: F31D4.1.1
    Other_sequence: HBC04104_1
      EX913672.1
      CBC10808_1
      EX007725.1
      CJC15594_1
      EX008213.1
      Hbac_isotig03422
    Associated_feature: WBsf233224
      WBsf233225
  Experimental_info: RNAi_result: WBRNAi00008731 Inferred_automatically: RNAi_primary
      WBRNAi00025339 Inferred_automatically: RNAi_primary
      WBRNAi00045999 Inferred_automatically: RNAi_primary
      WBRNAi00094028 Inferred_automatically: RNAi_primary
      WBRNAi00094306 Inferred_automatically: RNAi_primary
      WBRNAi00094422 Inferred_automatically: RNAi_primary
      WBRNAi00071613 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1376
      Expr1015040
      Expr1034056
      Expr1149898
      Expr2011405
      Expr2029641
    Drives_construct: WBCnstr00010250
      WBCnstr00032309
    Construct_product: WBCnstr00010250
      WBCnstr00032309
    Microarray_results (19)
    Expression_cluster (97)
    Interaction (31)
  Map_info: Map: V Position: 25.3675 Error: 0.010397
    Positive: Positive_clone: F31D4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
    WBPaper00061983
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene