WormBase Tree Display for Gene: WBGene00009272
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| WBGene00009272 | SMap | S_parent | Sequence | F30F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | gras-1 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F30F8.3 | ||||||||
| Molecular_name | F30F8.3 | ||||||||
| F30F8.3.1 | |||||||||
| CE27147 | |||||||||
| Other_name | CELE_F30F8.3 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | gras-1 | ||||||||
| DB_info | Database | AceView | gene | 1I413 | |||||
| WormQTL | gene | WBGene00009272 | |||||||
| WormFlux | gene | WBGene00009272 | |||||||
| NDB | locus_tag | CELE_F30F8.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009272|UniProtKB=Q93654 | |||||||
| family | PTHR15963 | ||||||||
| NCBI | gene | 172549 | |||||||
| RefSeq | protein | NM_059763.7 | |||||||
| SwissProt | UniProtAcc | Q93654 | |||||||
| TREEFAM | TREEFAM_ID | TF316315 | |||||||
| UniProt_GCRP | UniProtAcc | Q93654 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 Feb 2012 16:30:56 | WBPerson2970 | Name_change | CGC_name | gras-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gras | ||||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00086376 | ||||||||
| 00086377 | |||||||||
| 00086378 | |||||||||
| 00086379 | |||||||||
| 00086380 | |||||||||
| 00086381 | |||||||||
| 00086382 | |||||||||
| 00086383 | |||||||||
| Contained_in_operon | CEOP1424 | ||||||||
| Ortholog (41) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in meiotic cell cycle. Predicted to be located in nucleus; perinuclear region of cytoplasm; and plasma membrane. Expressed in oocyte. Is an ortholog of human CYTIP (cytohesin 1 interacting protein) and TAMALIN (trafficking regulator and scaffold protein tamalin). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F30F8.3 | |||||||
| Corresponding_CDS_history | F30F8.3:wp47 | ||||||||
| Corresponding_transcript | F30F8.3.1 | ||||||||
| Other_sequence | CJC10652_1 | ||||||||
| CBC06388_1 | |||||||||
| Associated_feature | WBsf643488 | ||||||||
| WBsf218073 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00077834 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00007745 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003541 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045969 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9718 | ||||||||
| Expr1019792 | |||||||||
| Expr1034046 | |||||||||
| Expr1149868 | |||||||||
| Expr2012223 | |||||||||
| Expr2030459 | |||||||||
| Drives_construct | WBCnstr00032323 | ||||||||
| Construct_product | WBCnstr00032323 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (126) | |||||||||
| Interaction (1000) | |||||||||
| Map_info | Map | I | Position | 2.37347 | |||||
| Positive | Positive_clone | F30F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00055090 | ||||||||
| WBPaper00057763 | |||||||||
| WBPaper00063117 | |||||||||
| WBPaper00065052 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
