WormBase Tree Display for Gene: WBGene00009233
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| WBGene00009233 | SMap | S_parent | Sequence | F28H6 | ||
|---|---|---|---|---|---|---|
| Identity (6) | ||||||
| Gene_info | Biotype | SO:0001217 | ||||
| Allele (95) | ||||||
| RNASeq_FPKM (74) | ||||||
| Ortholog (29) | ||||||
| Paralog (37) | ||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalppppppp; OLL; RIM; germ line; and interneuron based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; tiling array; and proteomic studies. Is affected by eight chemicals including D-glucose; stavudine; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Homeobox-like domain superfamily; Phosphorylation site; SPK domain; and Domain of unknown function (DUF545). | Paper_evidence | WBPaper00065943 | ||
| Curator_confirmed | WBPerson324 | |||||
| WBPerson37462 | ||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||
| Molecular_info | Corresponding_CDS | F28H6.4 | ||||
| Corresponding_transcript | F28H6.4.1 | |||||
| Associated_feature | WBsf1007832 | |||||
| WBsf1024358 | ||||||
| WBsf236644 | ||||||
| WBsf236645 | ||||||
| Experimental_info | RNAi_result | WBRNAi00001139 | Inferred_automatically | RNAi_primary | ||
| WBRNAi00031549 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00014076 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00014075 | Inferred_automatically | RNAi_primary | ||||
| WBRNAi00045874 | Inferred_automatically | RNAi_primary | ||||
| Expr_pattern | Expr1026992 | |||||
| Expr1034030 | ||||||
| Expr1149777 | ||||||
| Expr2003121 | ||||||
| Expr2021335 | ||||||
| Drives_construct | WBCnstr00032354 | |||||
| Construct_product | WBCnstr00032354 | |||||
| Microarray_results | SMD_F28H6.4 | |||||
| SMD_F28H6.5 | ||||||
| 178753_at | ||||||
| A_12_P113357 | ||||||
| Aff_F28H6.4 | ||||||
| Aff_F28H6.5 | ||||||
| GPL13394_WBGene00009233 | ||||||
| GPL13914_F28H6.4 | ||||||
| GPL14144_F28H6.4_421-480_0.795_118_B | ||||||
| GPL14144_F28H6.4_500-559_0.804_104_A | ||||||
| GPL14144_F28H6.4_708-767_0.806_101_C | ||||||
| GPL19516_CGZ0018808 | ||||||
| GPL3518_CE23688 | ||||||
| GPL8304_CE_WBGene00009233_A | ||||||
| GPL8304_CE_WBGene00009233_B | ||||||
| GPL8304_CE_WBGene00009233_C | ||||||
| GPL8673_F28H6_4P01805 | ||||||
| GPL8673_F28H6_4P02269 | ||||||
| GPL8673_F28H6_4P02876 | ||||||
| GPL9450_F28H6.4 | ||||||
| cea2.p.142645 | ||||||
| Expression_cluster (146) | ||||||
| Interaction (11) | ||||||
| Map_info | Positive | Positive_clone | F28H6 | Inferred_automatically | From sequence, transcript, pseudogene data | |
| Interpolated_map_position | X | 16.5096 | ||||
| Method | Gene |
