WormBase Tree Display for Gene: WBGene00009219
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| WBGene00009219 | SMap | S_parent | Sequence | F28D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dpm-3 | |||||||
| Sequence_name | F28D1.11 | ||||||||
| Molecular_name | F28D1.11 | ||||||||
| F28D1.11.1 | |||||||||
| CE20732 | |||||||||
| Other_name | CELE_F28D1.11 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | dpm-3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 14 Mar 2008 13:46:22 | WBPerson2970 | Name_change | CGC_name | dpm-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dpm | ||||||||
| Allele (14) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00102895 | ||||||||
| 00102896 | |||||||||
| 00102897 | |||||||||
| 00102898 | |||||||||
| 00102899 | |||||||||
| 00102900 | |||||||||
| 00116980 | |||||||||
| Ortholog (25) | |||||||||
| Structured_description | Concise_description | dpm-3 encodes a putative regulatory subunit of dolichol phosphate mannosyltransferase, orthologous to human DPM3 (OMIM:605951); in mass RNAi assays, DPM-3 is required for normal body size, fertility, and health. | Paper_evidence | WBPaper00004651 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 14 Mar 2008 00:00:00 | ||||||||
| Automated_description | Predicted to be involved in protein glycosylation. Predicted to be located in endoplasmic reticulum membrane. Predicted to be part of dolichol-phosphate-mannose synthase complex. Human ortholog(s) of this gene implicated in congenital disorder of glycosylation type I and muscular dystrophy-dystroglycanopathy type B15. Is an ortholog of human DPM3 (dolichyl-phosphate mannosyltransferase subunit 3, regulatory). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112376 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3007) | ||||
| DOID:0050570 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:3007) | ||||||
| Molecular_info | Corresponding_CDS | F28D1.11 | |||||||
| Corresponding_transcript | F28D1.11.1 | ||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf646471 | ||||||||
| WBsf229286 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr1011151 | ||||||||
| Expr1034022 | |||||||||
| Expr1149733 | |||||||||
| Expr2011052 | |||||||||
| Expr2029289 | |||||||||
| Drives_construct | WBCnstr00032360 | ||||||||
| Construct_product | WBCnstr00032360 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (103) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | IV | Position | 5.90302 | |||||
| Positive | Positive_clone | F28D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00045573 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
