WormBase Tree Display for Gene: WBGene00009171
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| WBGene00009171 | SMap | S_parent | Sequence | F26F2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-263 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | F26F2.6 | ||||||||
| Molecular_name | F26F2.6 | ||||||||
| F26F2.6.1 | |||||||||
| CE31796 | |||||||||
| Other_name | CELE_F26F2.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-263 | ||||||||
| DB_info | Database | AceView | gene | 5V43 | |||||
| WormQTL | gene | WBGene00009171 | |||||||
| WormFlux | gene | WBGene00009171 | |||||||
| NDB | locus_tag | CELE_F26F2.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009171|UniProtKB=Q9XV53 | |||||||
| family | PTHR47629 | ||||||||
| NCBI | gene | 184987 | |||||||
| RefSeq | protein | NM_075570.5 | |||||||
| TREEFAM | TREEFAM_ID | TF317657 | |||||||
| TrEMBL | UniProtAcc | Q9XV53 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XV53 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:28 | WBPerson2970 | Name_change | CGC_name | clec-263 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (160) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (16) | |||||||||
| Paralog (114) | |||||||||
| Structured_description | Automated_description | Enriched in male-specific anatomical entity based on microarray studies. Is affected by several genes including rrf-3; eat-2; and tph-1 based on tiling array; RNA-seq; and microarray studies. Is affected by eight chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; PAN-like domain; PAN-3 domain; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F26F2.6 | |||||||
| Corresponding_CDS_history | F26F2.6:wp84 | ||||||||
| Corresponding_transcript | F26F2.6.1 | ||||||||
| Associated_feature | WBsf233208 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00031460 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013959 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045661 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010346 | ||||||||
| Expr1149577 | |||||||||
| Expr2010155 | |||||||||
| Expr2028398 | |||||||||
| Drives_construct | WBCnstr00032401 | ||||||||
| Construct_product | WBCnstr00032401 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (54) | |||||||||
| Interaction | WBInteraction000264079 | ||||||||
| WBInteraction000274172 | |||||||||
| WBInteraction000287993 | |||||||||
| WBInteraction000307034 | |||||||||
| WBInteraction000392590 | |||||||||
| Map_info | Map | V | Position | 25.0144 | Error | 0.000865 | |||
| Positive | Positive_clone | F26F2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031686 | ||||||||
| WBPaper00033118 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
