WormBase Tree Display for Gene: WBGene00009122
expand all nodes | collapse all nodes | view schema
WBGene00009122 | SMap | S_parent | Sequence | F25H2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | tct-1 | Person_evidence | WBPerson565 | |||||
Sequence_name | F25H2.11 | ||||||||
Molecular_name | F25H2.11 | ||||||||
F25H2.11.1 | |||||||||
CE09656 | |||||||||
Other_name | CELE_F25H2.11 | Accession_evidence | NDB | BX284601 | |||||
Public_name | tct-1 | ||||||||
DB_info | Database | AceView | gene | 1L147 | |||||
WormQTL | gene | WBGene00009122 | |||||||
WormFlux | gene | WBGene00009122 | |||||||
NDB | locus_tag | CELE_F25H2.11 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009122|UniProtKB=Q93573 | |||||||
family | PTHR11991 | ||||||||
NCBI | gene | 172944 | |||||||
RefSeq | protein | NM_001392937.1 | |||||||
SwissProt | UniProtAcc | Q93573 | |||||||
TREEFAM | TREEFAM_ID | TF300238 | |||||||
UniProt_GCRP | UniProtAcc | Q93573 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 02 Jul 2004 16:55:44 | WBPerson1971 | Name_change | CGC_name | tct-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tct | ||||||||
Allele (20) | |||||||||
Strain | WBStrain00053453 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00086209 | ||||||||
00086210 | |||||||||
00086211 | |||||||||
00086212 | |||||||||
00086213 | |||||||||
Contained_in_operon | CEOP1624 | ||||||||
Ortholog (38) | |||||||||
Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Located in endoplasmic reticulum. Is an ortholog of human TPT1 (tumor protein, translationally-controlled 1). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F25H2.11 | |||||||
Corresponding_transcript | F25H2.11.1 | ||||||||
Associated_feature | WBsf218455 | ||||||||
WBsf218456 | |||||||||
WBsf218457 | |||||||||
Experimental_info | RNAi_result (20) | ||||||||
Expr_pattern | Expr8606 | ||||||||
Expr8607 | |||||||||
Expr9546 | |||||||||
Expr1015594 | |||||||||
Expr1033973 | |||||||||
Expr1149449 | |||||||||
Expr2017364 | |||||||||
Expr2035501 | |||||||||
Drives_construct | WBCnstr00032447 | ||||||||
Construct_product | WBCnstr00014111 | ||||||||
WBCnstr00032447 | |||||||||
Antibody | WBAntibody00001910 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (156) | |||||||||
Interaction (104) | |||||||||
Map_info | Map | I | Position | 5.05566 | Error | 9.3e-05 | |||
Positive | Positive_clone | F25H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (15) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |