WormBase Tree Display for Gene: WBGene00009108
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WBGene00009108 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F25D1.3 | |||||||
Molecular_name | F25D1.3 | ||||||||
F25D1.3.1 | |||||||||
CE31917 | |||||||||
Other_name | CELE_F25D1.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | F25D1.3 | ||||||||
DB_info | Database | AceView | gene | 5L9 | |||||
WormQTL | gene | WBGene00009108 | |||||||
WormFlux | gene | WBGene00009108 | |||||||
NDB | locus_tag | CELE_F25D1.3 | |||||||
NCBI | gene | 179468 | |||||||
RefSeq | protein | NM_073299.6 | |||||||
TREEFAM | TREEFAM_ID | TF314701 | |||||||
TrEMBL | UniProtAcc | G5EDD7 | |||||||
UniProt_GCRP | UniProtAcc | G5EDD7 | |||||||
OMIM | gene | 606496 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (54) | |||||||||
Strain | WBStrain00037741 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00013735 | ||||||||
00116871 | |||||||||
00116872 | |||||||||
Ortholog | WBGene00152309 | Caenorhabditis brenneri | From_analysis | OMA | |||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00155989 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00031189 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
OrthoMCL | |||||||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00065052 | Caenorhabditis remanei | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00138409 | Caenorhabditis japonica | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00223832 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
CBOVI.g360 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CSP21.g12055 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
CSP26.g293 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP28.g4460 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP29.g3558 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP31.g19756 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP32.g473 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
CSP38.g9814 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
CSP39.g20928 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP39.g8689 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP40.g1482 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Cni-F25D1.3 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold629.g15545 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_01710.g22660 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_11779 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_016425 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
Sp34_50293700 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrV_pilon.g15544 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00244219 | Onchocerca volvulus | From_analysis | WormBase-Compara | ||||||
WBGene00304832 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00255756 | Strongyloides ratti | From_analysis | WormBase-Compara | ||||||
ZFIN:ZDB-GENE-061031-3 | Danio rerio | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
ZFIN:ZDB-GENE-061031-5 | Danio rerio | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
ZFIN:ZDB-GENE-041001-192 | Danio rerio | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
ZFIN:ZDB-GENE-061031-2 | Danio rerio | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
HGNC:5981 | Homo sapiens | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
HGNC:5983 | Homo sapiens | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
HGNC:16404 | Homo sapiens | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
MGI:107364 | Mus musculus | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
MGI:2446486 | Mus musculus | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
MGI:2676631 | Mus musculus | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
RGD:2888 | Rattus norvegicus | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
RGD:1311398 | Rattus norvegicus | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
RGD:1582798 | Rattus norvegicus | From_analysis | EnsEMBL-Compara | ||||||
OrthoFinder | |||||||||
Structured_description | Automated_description | Predicted to enable cytokine activity. Predicted to be involved in signal transduction. Predicted to be located in extracellular region. Human ortholog(s) of this gene implicated in several diseases, including autoimmune disease (multiple); eye disease (multiple); and lung disease (multiple). Is an ortholog of human IL17A (interleukin 17A); IL17C (interleukin 17C); and IL17F (interleukin 17F). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:9111 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||
DOID:9008 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:1024 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:8893 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:3770 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:2841 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:13141 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:2058 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:16404) | ||||||
DOID:0080600 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:4448 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:13241 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:2942 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:1273 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:3310 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:4481 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:7148 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:2316 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:9074 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:3083 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:6543 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:11265 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:10763 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:12306 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:13375 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:0050169 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:2755 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:418 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:1485 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:2377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:7147 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:4483 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
DOID:12361 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5981) | ||||||
Molecular_info | Corresponding_CDS | F25D1.3 | |||||||
Corresponding_CDS_history | F25D1.3:wp87 | ||||||||
Corresponding_transcript | F25D1.3.1 | ||||||||
Other_sequence | Dviv_isotig10249 | ||||||||
Dviv_isotig10246 | |||||||||
Tcol_isotig19853 | |||||||||
JI182322.1 | |||||||||
Dviv_isotig10248 | |||||||||
Dviv_isotig10247 | |||||||||
Associated_feature | WBsf647169 | ||||||||
WBsf1001135 | |||||||||
WBsf232392 | |||||||||
Experimental_info | RNAi_result | WBRNAi00031363 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00045487 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013862 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1025349 | ||||||||
Expr1149405 | |||||||||
Expr2002951 | |||||||||
Expr2021167 | |||||||||
Drives_construct | WBCnstr00032458 | ||||||||
Construct_product | WBCnstr00032458 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (126) | |||||||||
Interaction (19) | |||||||||
Map_info | Positive | Positive_clone | F25D1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 2.57146 | |||||||
Method | Gene |