WormBase Tree Display for Gene: WBGene00009081
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WBGene00009081 | SMap | S_parent | Sequence | F23B12 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | Sequence_name | F23B12.4 | |||||||
Molecular_name (9) | |||||||||
Other_name | CELE_F23B12.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | F23B12.4 | ||||||||
DB_info | Database | AceView | gene | 5O923 | |||||
WormQTL | gene | WBGene00009081 | |||||||
WormFlux | gene | WBGene00009081 | |||||||
NDB | locus_tag | CELE_F23B12.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00009081|UniProtKB=A8WHS3 | |||||||
family | PTHR45828 | ||||||||
NCBI | gene | 179944 | |||||||
RefSeq | protein | NM_001129454.3 | |||||||
NM_001373159.4 | |||||||||
NM_001129455.3 | |||||||||
TREEFAM | TREEFAM_ID | TF319608 | |||||||
TrEMBL | UniProtAcc | Q19751 | |||||||
A8WHS3 | |||||||||
E1B6T5 | |||||||||
UniProt_GCRP | UniProtAcc | A8WHS3 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 15 Oct 2007 16:56:25 | WBPerson2970 | Event | Acquires_merge | WBGene00009080 | ||||
Acquires_merge | WBGene00009080 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (62) | |||||||||
Strain | WBStrain00037113 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (39) | |||||||||
Paralog | WBGene00007339 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
WBGene00007545 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00013292 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00016627 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00019746 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00044589 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00077490 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABalaapppa; ABalapaapa; ABalappaap; ABalapppaa; and PLM based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty chemicals including Lithium Chloride; hydrogen sulfide; and methylmercury hydroxide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Reeler domain superfamily and Reeler domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F23B12.4a | |||||||
F23B12.4b | |||||||||
F23B12.4c | |||||||||
Corresponding_CDS_history | F23B12.4:wp90 | ||||||||
F23B12.4a:wp193 | |||||||||
Corresponding_transcript | F23B12.4a.1 | ||||||||
F23B12.4b.1 | |||||||||
F23B12.4c.1 | |||||||||
Other_sequence (24) | |||||||||
Associated_feature (12) | |||||||||
Experimental_info | RNAi_result | WBRNAi00027296 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00013796 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00031304 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045379 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045380 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013797 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00025196 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00031305 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1024274 | ||||||||
Expr1033955 | |||||||||
Expr1149303 | |||||||||
Expr2002901 | |||||||||
Expr2021118 | |||||||||
Drives_construct | WBCnstr00032480 | ||||||||
Construct_product | WBCnstr00032480 | ||||||||
Microarray_results (38) | |||||||||
Expression_cluster (192) | |||||||||
Interaction (44) | |||||||||
Map_info | Positive | Positive_clone | F23B12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 6.33929 | |||||||
Method | Gene |