WormBase Tree Display for Gene: WBGene00009078

WBGene00009078 SMap: S_parent: Sequence: F23B2
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: rpb
    Allele (16)
    Strain: WBStrain00049346
    RNASeq_FPKM (74)
    GO_annotation (16)
    Ortholog: WBGene00040472 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
      WBGene00063906 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
      SGD:S000001185 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0262954 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-070820-18 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:9198 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:102725 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:2319895 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable DNA binding activity; DNA-directed 5'-3' RNA polymerase activity; and zinc ion binding activity. Predicted to contribute to RNA polymerase I activity; RNA polymerase II activity; and RNA polymerase III activity. Predicted to be involved in transcription by RNA polymerase I; transcription by RNA polymerase II; and transcription by RNA polymerase III. Predicted to be part of RNA polymerase I complex; RNA polymerase II, core complex; and RNA polymerase III complex. Is an ortholog of human POLR2K (RNA polymerase II, I and III subunit K). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F23B2.13a
      F23B2.13b
    Corresponding_transcript: F23B2.13a.1
      F23B2.13b.1
    Other_sequence (303)
    Associated_feature: WBsf652039
      WBsf997367
      WBsf230514
  Experimental_info: RNAi_result (20)
    Expr_pattern: Expr1013932
      Expr1033954
      Expr1149312
      Expr2015421
      Expr2033656
    Drives_construct: WBCnstr00032482
    Construct_product: WBCnstr00032482
    Microarray_results (17)
    Expression_cluster (115)
    Interaction (159)
  Map_info: Map: IV Position: 4.06918 Error: 0.005755
    Positive: Positive_clone: F23B2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00029038
    WBPaper00038491
    WBPaper00055090
    WBPaper00059527
    WBPaper00065275
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene