WormBase Tree Display for Gene: WBGene00009052
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| WBGene00009052 | SMap | S_parent | Sequence | F22D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ekl-1 | Person_evidence | WBPerson524 | |||||
| WBPerson637 | |||||||||
| Sequence_name | F22D6.6 | ||||||||
| Molecular_name | F22D6.6 | ||||||||
| F22D6.6.1 | |||||||||
| CE05687 | |||||||||
| Other_name | CELE_F22D6.6 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | ekl-1 | ||||||||
| DB_info | Database | AceView | gene | 1H673 | |||||
| WormQTL | gene | WBGene00009052 | |||||||
| WormFlux | gene | WBGene00009052 | |||||||
| NDB | locus_tag | CELE_F22D6.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009052|UniProtKB=Q19731 | |||||||
| family | PTHR22948 | ||||||||
| NCBI | gene | 172444 | |||||||
| RefSeq | protein | NM_059608.6 | |||||||
| TREEFAM | TREEFAM_ID | TF320692 | |||||||
| TrEMBL | UniProtAcc | Q19731 | |||||||
| UniProt_GCRP | UniProtAcc | Q19731 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Jul 2005 13:34:00 | WBPerson2970 | Name_change | CGC_name | ekl-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ekl | ||||||||
| Allele (36) | |||||||||
| Strain | WBStrain00037698 | ||||||||
| WBStrain00006419 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00065663 | ||||||||
| 00065664 | |||||||||
| 00065665 | |||||||||
| 00065666 | |||||||||
| 00065667 | |||||||||
| 00065668 | |||||||||
| 00065669 | |||||||||
| Contained_in_operon | CEOP1909 | ||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00004684 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00021419 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016977 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00017992 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00016203 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Involved in P granule assembly and siRNA processing. Located in condensed nuclear chromosome; cytoplasm; and metaphase plate. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F22D6.6 | |||||||
| Corresponding_transcript | F22D6.6.1 | ||||||||
| Other_sequence | CSC01257_1 | ||||||||
| CJC03371_1 | |||||||||
| CR05197 | |||||||||
| CBC05772_1 | |||||||||
| FD516721.1 | |||||||||
| Oden_isotig20625 | |||||||||
| CRC07730_1 | |||||||||
| Hbac_isotig00518 | |||||||||
| Associated_feature | WBsf656486 | ||||||||
| WBsf217943 | |||||||||
| WBsf217944 | |||||||||
| WBsf217945 | |||||||||
| WBsf217946 | |||||||||
| WBsf217947 | |||||||||
| Experimental_info | RNAi_result (29) | ||||||||
| Expr_pattern | Expr8819 | ||||||||
| Expr9632 | |||||||||
| Expr1014150 | |||||||||
| Expr1033948 | |||||||||
| Expr1149243 | |||||||||
| Expr2011265 | |||||||||
| Expr2029501 | |||||||||
| Drives_construct | WBCnstr00032496 | ||||||||
| Construct_product | WBCnstr00032496 | ||||||||
| Antibody | WBAntibody00002002 | ||||||||
| WBAntibody00002010 | |||||||||
| WBAntibody00002851 | |||||||||
| WBAntibody00002901 | |||||||||
| WBAntibody00002902 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (129) | |||||||||
| Interaction (17) | |||||||||
| Map_info | Map | I | Position | 1.73494 | Error | 0.002662 | |||
| Positive | Positive_clone | F22D6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (22) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
