WormBase Tree Display for Gene: WBGene00008987
expand all nodes | collapse all nodes | view schema
| WBGene00008987 | SMap | S_parent | Sequence | F20G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F20G2.3 | |||||||
| Molecular_name | F20G2.3a | ||||||||
| F20G2.3a.1 | |||||||||
| CE09506 | |||||||||
| F20G2.3b | |||||||||
| CE42946 | |||||||||
| F20G2.3b.1 | |||||||||
| Other_name | CELE_F20G2.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | F20G2.3 | ||||||||
| DB_info | Database | AceView | gene | 5O246 | |||||
| WormQTL | gene | WBGene00008987 | |||||||
| WormFlux | gene | WBGene00008987 | |||||||
| NDB | locus_tag | CELE_F20G2.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008987|UniProtKB=Q93546 | |||||||
| family | PTHR47159 | ||||||||
| NCBI | gene | 179870 | |||||||
| RefSeq | protein | NM_074007.8 | |||||||
| NM_001136421.4 | |||||||||
| TREEFAM | TREEFAM_ID | TF313988 | |||||||
| TrEMBL | UniProtAcc | Q93546 | |||||||
| B5BM31 | |||||||||
| UniProt_GCRP | UniProtAcc | Q93546 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including anterior hypodermis; germ line; germline precursor cell; interfacial epithelial cell; and sensory neurons based on microarray; tiling array; RNA-seq; proteomic; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray; proteomic; and RNA-seq studies. Is affected by nineteen chemicals including methylmercury hydroxide; manganese chloride; and D-glucose based on RNA-seq; microarray; and proteomic studies. Is predicted to encode a protein with the following domain: GOLD domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F20G2.3a | |||||||
| F20G2.3b | |||||||||
| Corresponding_transcript | F20G2.3a.1 | ||||||||
| F20G2.3b.1 | |||||||||
| Other_sequence (49) | |||||||||
| Associated_feature | WBsf653342 | ||||||||
| WBsf653343 | |||||||||
| WBsf1001887 | |||||||||
| WBsf234862 | |||||||||
| WBsf234863 | |||||||||
| WBsf234864 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00045138 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031184 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013643 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026226 | ||||||||
| Expr1033912 | |||||||||
| Expr1149082 | |||||||||
| Expr2002796 | |||||||||
| Expr2021013 | |||||||||
| Drives_construct | WBCnstr00032543 | ||||||||
| Construct_product | WBCnstr00032543 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (195) | |||||||||
| Interaction (78) | |||||||||
| Map_info | Positive | Positive_clone | F20G2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 5.58676 | |||||||
| Reference | WBPaper00055090 | ||||||||
| Method | Gene |
