WormBase Tree Display for Gene: WBGene00008979
expand all nodes | collapse all nodes | view schema
| WBGene00008979 | SMap | S_parent | Sequence | F20D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | slc-25A18.1 | |||||||
| Sequence_name | F20D1.9 | ||||||||
| Molecular_name | F20D1.9 | ||||||||
| F20D1.9.1 | |||||||||
| CE47961 | |||||||||
| Other_name | CELE_F20D1.9 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | slc-25A18.1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 16 Jan 2018 11:32:43 | WBPerson1983 | Name_change | CGC_name | slc-25A18.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | slc | ||||||||
| Allele (37) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Contained_in_operon | CEOPX132 | ||||||||
| Ortholog (44) | |||||||||
| Paralog (35) | |||||||||
| Structured_description | Automated_description | Predicted to enable L-aspartate transmembrane transporter activity and L-glutamate transmembrane transporter activity. Predicted to be involved in L-glutamate transmembrane transport; aspartate transmembrane transport; and malate-aspartate shuttle. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 3. Is an ortholog of human SLC25A18 (solute carrier family 25 member 18) and SLC25A22 (solute carrier family 25 member 22). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0080440 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:19954) | ||||
| Molecular_info | Corresponding_CDS | F20D1.9 | |||||||
| Corresponding_CDS_history | F20D1.9:wp234 | ||||||||
| Corresponding_transcript | F20D1.9.1 | ||||||||
| Other_sequence | NBC07544_1 | ||||||||
| CR09584 | |||||||||
| Tcol_isotig12912 | |||||||||
| PP00142 | |||||||||
| CK854937.1 | |||||||||
| ACC28739_1 | |||||||||
| EX547454.1 | |||||||||
| GE625324.1 | |||||||||
| CRC00304_1 | |||||||||
| MC03150 | |||||||||
| MHC00011_1 | |||||||||
| EX914358.1 | |||||||||
| Tcir_isotig09970 | |||||||||
| FC541134.1 | |||||||||
| EX534764.1 | |||||||||
| EX548333.1 | |||||||||
| Hbac_isotig02844 | |||||||||
| HCC07739_1 | |||||||||
| EX543155.1 | |||||||||
| Dviv_isotig03376 | |||||||||
| HBC01160_1 | |||||||||
| ACC09390_1 | |||||||||
| AE03707 | |||||||||
| MH02151 | |||||||||
| Acan_isotig17787 | |||||||||
| NB09761 | |||||||||
| Oden_isotig14861 | |||||||||
| EX550339.1 | |||||||||
| WBC02285_1 | |||||||||
| EY464730.1 | |||||||||
| PSC00437_1 | |||||||||
| EX541229.1 | |||||||||
| JI173551.1 | |||||||||
| SS01694 | |||||||||
| EX008207.1 | |||||||||
| GW407901.1 | |||||||||
| Dviv_isotig03374 | |||||||||
| JI175964.1 | |||||||||
| FC539268.1 | |||||||||
| FC549608.1 | |||||||||
| MHC11409_1 | |||||||||
| FC543473.1 | |||||||||
| Dviv_isotig03373 | |||||||||
| EX539948.1 | |||||||||
| Dviv_isotig03375 | |||||||||
| EX537256.1 | |||||||||
| CJC11666_1 | |||||||||
| Acan_isotig02425 | |||||||||
| PPC00941_1 | |||||||||
| Oden_isotig14860 | |||||||||
| EX547012.1 | |||||||||
| Oden_isotig19259 | |||||||||
| CGC01519_1 | |||||||||
| CR02079 | |||||||||
| Acan_isotig12856 | |||||||||
| HC08256 | |||||||||
| EX557733.1 | |||||||||
| ACC14611_1 | |||||||||
| Acan_isotig23001 | |||||||||
| DAC01092_1 | |||||||||
| CRC02306_1 | |||||||||
| JI467711.1 | |||||||||
| EX910521.1 | |||||||||
| MCC02395_1 | |||||||||
| Acan_isotig18849 | |||||||||
| SSC00001_1 | |||||||||
| EX537320.1 | |||||||||
| HC01459 | |||||||||
| ACC07871_1 | |||||||||
| Associated_feature | WBsf1008064 | ||||||||
| WBsf238279 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013618 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076320 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094935 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045100 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023428 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00117467 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024003 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023715 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031169 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023203 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1183 | ||||||||
| Expr5804 | |||||||||
| Expr14638 | |||||||||
| Expr1026344 | |||||||||
| Expr1033909 | |||||||||
| Expr1149050 | |||||||||
| Expr2002780 | |||||||||
| Expr2020998 | |||||||||
| Drives_construct | WBCnstr00004085 | ||||||||
| WBCnstr00032549 | |||||||||
| WBCnstr00041189 | |||||||||
| Construct_product | WBCnstr00032549 | ||||||||
| WBCnstr00041189 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (131) | |||||||||
| Interaction (51) | |||||||||
| Map_info | Map | X | Position | 21.7444 | |||||
| Positive | Positive_clone | F20D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059575 | |||||||||
| WBPaper00061547 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
