WormBase Tree Display for Gene: WBGene00008973
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| WBGene00008973 | SMap | S_parent | Sequence | F20D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | flwr-1 | |||||||
| Sequence_name | F20D1.1 | ||||||||
| Molecular_name | F20D1.1 | ||||||||
| F20D1.1.1 | |||||||||
| CE09494 | |||||||||
| Other_name | CELE_F20D1.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | flwr-1 | ||||||||
| DB_info | Database | AceView | gene | XP588 | |||||
| WormQTL | gene | WBGene00008973 | |||||||
| WormFlux | gene | WBGene00008973 | |||||||
| NDB | locus_tag | CELE_F20D1.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008973|UniProtKB=Q93533 | |||||||
| family | PTHR13314 | ||||||||
| NCBI | gene | 181591 | |||||||
| RefSeq | protein | NM_078083.7 | |||||||
| TREEFAM | TREEFAM_ID | TF105629 | |||||||
| TrEMBL | UniProtAcc | Q93533 | |||||||
| UniProt_GCRP | UniProtAcc | Q93533 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Jun 2020 17:41:30 | WBPerson1983 | Name_change | CGC_name | flwr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | flwr | ||||||||
| Allele (35) | |||||||||
| Strain | WBStrain00035299 | ||||||||
| WBStrain00032983 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Predicted to enable calcium channel activity. Predicted to be involved in vesicle-mediated transport. Predicted to be located in synaptic vesicle membrane. Expressed in several structures, including anterior gonad arm. Is an ortholog of human CACFD1 (calcium channel flower domain containing 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F20D1.1 | |||||||
| Corresponding_transcript | F20D1.1.1 | ||||||||
| Other_sequence (53) | |||||||||
| Associated_feature | WBsf654621 | ||||||||
| WBsf671312 | |||||||||
| WBsf671313 | |||||||||
| WBsf1008052 | |||||||||
| WBsf1008053 | |||||||||
| WBsf1008054 | |||||||||
| WBsf1024491 | |||||||||
| WBsf238272 | |||||||||
| WBsf238273 | |||||||||
| WBsf238274 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013610 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033264 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001605 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045092 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram896 | ||||||||
| Expr7512 | |||||||||
| Expr13092 | |||||||||
| Expr1021978 | |||||||||
| Expr1033905 | |||||||||
| Expr1149042 | |||||||||
| Expr2002778 | |||||||||
| Expr2020996 | |||||||||
| Drives_construct | WBCnstr00001109 | ||||||||
| WBCnstr00012657 | |||||||||
| WBCnstr00032555 | |||||||||
| Construct_product | WBCnstr00032555 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction (72) | |||||||||
| Map_info | Map | X | Position | 21.6111 | |||||
| Positive | Positive_clone | F20D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
